Detailed information of OFRAG00000013835.1 in Osedax frankpressi Gene info
Gene IDAnnotationScaffoldStartEndStrand
OFRAG00000013835.1LIM/HOMEOBOX PROTEIN LHXtig000039691840065922-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR050453FamilyLIM/homeobox transcription factorsInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24208LIM/HOMEOBOX PROTEIN LHXInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0030182Biological Processneuron differentiationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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