Detailed information of OFRAG00000010671.1 in Osedax frankpressi Gene info
Gene IDAnnotationScaffoldStartEndStrand
OFRAG00000010671.1BITESIZE, ISOFORM Itig00002009129215171445+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SKP1

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00168C2C2 domainDomainInterproscan
PF01466Skp1Skp1 family, dimerisation domainDomainInterproscan
PF02318FYVE_2FYVE-type zinc fingerFamilyInterproscan
PF03931Skp1_POZSkp1 family, tetramerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR001232FamilyS-phase kinase-associated protein 1-likeInterproscan
IPR010911DomainRab-binding domainInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR016072DomainSKP1 component, dimerisationInterproscan
IPR016073DomainSKP1 component, POZ domainInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR036296Homologous_superfamilySKP1-like, dimerisation domain superfamilyInterproscan
IPR041282DomainFYVE-type zinc fingerInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45716BITESIZE, ISOFORM IInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006887Biological ProcessexocytosisInterproscan
GO:0031267Molecular Functionsmall GTPase bindingInterproscan
GO:0042043Molecular Functionneurexin family protein bindingInterproscan
GO:0070382Cellular Componentexocytic vesicleInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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