Gene detail

Detailed information of OFRAG00000009580.2 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000009580.2	UNCHARACTERIZED	tig00001644	86843	170065	+

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000009580.2

ATGACGCCATCAGTTGTTAATCTATCTATAAAAGATAGAAGAACAAGTAGTGGACGTGACATGTTCATGTATGGAATATCTTCTTATAAAGAATTGCGAGCTCAACTTATAAAGGAGTTTGTAATTCGTGGAAAGAAATTTGTTCTAACGAACACCAACCGAGAGTTAATCACGGATACAAATTTTGGAGAACTACTGAATGGCGAATGTGTATATGTACTTCTTGAGATAAACCAGACGCTGACCAAACCTATAATGGAGACTATAGAGTTCACCCCGCATTACGACACCATCGTCAAAGGTGGTATGTACGAGTACTACGCCAGCGAGGGCCAGAATCCCATTCCATATGCTCTCGCTGAACTGGTTGATAATGCTCTCTCTGCAACAGTCACCAACACTTTCTCAAGAAACATTGAATTAAGATTTTATATGGACGAAGGCAGCAAGTCGAGTCTTTATGTATTGGACAACGGCCGAGGTATGGATTCCAGGCAACTTAATAAGTGGGCCATATACCGTCTATCTAAAGATGTCCGCAGTAAGATGGATCTGAAGGAGAGGCTGCGCAAAGAGGGGGCGTGGATCCTCGACAAGGACGGTCAAAGGGTGCAAAATGGAGCCGGCGGGGACGGGAACAACTTTCAGGAACAGCTGGCCGAGGAGAAGGAGGTGAAGAGGTCGTTGAACAGCGAAATCTCATTCTTCGGAGTCGGCGGCAAACAGGCTGTCTTCTTTCTTGGCAATGCTGCCACGATGATCACCAAGACGAGCCAGTCATGCGATGTTCATGAACTACGAATGTCCCAAGAAGATTTTGAGATTAAGGAACGCGACAACATACCCATCTACAACGGATTCATTCTCAACAGACAGATCTGCGACAGTAACCACGTTAACGACGACGACTACATCAGGAAACGCGTAATCGCGTCCGAAAACGAAAAGGACCAGTTCACTGTTGTTGCCATCAACGGCATCGGGATAGAGAACGCCAACTACCTGAAACAGCATTTCGCCGAGTGGACCTGCAACTTGTCGCATATCTACCATTACTACCTTCATGGACCTACTGGCAATTTGGACGCTGAATCTCTGCTGGATAAAACCATTGATGACTTTCGTCGTATCCACATATCCGTATCGATGTTTAACAATCGAGGTGAGCCCATAGGGGAGCCACTTGCTCTGCGTAGTGTTGACGACGCCCCCTCCAAGCTGATCAGAACCGCAGTCGACGATACCTTCGAGTTCAAGGCCACCGTCGGTGGAATAGCCGAGGTAGAAGGTCAAATTCGTTACCACCCGTTCCTCTATGACAAGGAGTCCTATCCAAGTTCTGACCCAGATTCAGGTGAACCTCCTAAGGGAAGAGATGGAAAACCTATATTTGAATGCTACTGGAATGGGAGACTAATTCCCTACACTTCAATTGATTCGTTCCCATGGTGTGTGACACCTAAACATTCCAAGAATCCTCCGCTGGAGTGCTATAATAGAATATCGGGAGTACTGTGGACTAATGACTCATTTCAAGTGAGCACCAACAAACTCACATTCCTGGACATGGAAATGAAACTCAAAGATAAGTGCACTGTTTTCTCAAGGGTCAAGGGCAAAAACGACAAAAGGGGAGATATTGCAAAAGATTTCTCCATTTGGCTTAGGCACTGTAATAAAAACTATGATAAAAAGATCGAATATGTGAATCAGATTGCCTGTGACATCTCCCGTACAGATGTCAAGAAATCACTTGCTTACCCCTGGTGTAGCTACAAGACAATTGTCTGGGATCAAGTAAAGTATACAATTGGTCAAGTCGTACGTATAAAGACGACAACAATTGTGTACGGCATCATTGAGGAATTTCTGCTATACGGAACTTACCAGGACAACACTTTCTCCGCCGGAGGAGATGTTAGAGTTACTCTGTTGCCGAATATGTTTGACAAGCAGGAGAGAATCATGTCAATCAATCAAATCGACAGAACTGCTAGTCAAGAAAGCATTAGATTCGGTCTCAACCAAGAGAAACTCAAGTTTCCCAAAATACTGCGAGTCTCTTGGCCCGAGGGAAATAATCTCACTGGACGCACGGTTCTGCACGCCGGGGATAGCGTAGGTCCCATCAGTATTGAGATCCTCAATGGCAAAAATGAACCTATGGCTAAAATGGGATCTGCAACAACAATGAGAAAACTTTGTGTGAAACTTACAGTCTACCAACTAATGCCCGATGACACGGAGATTGTAACCATCTCACACATATCTCACCACGAGACAAAGAGTGAAACTAAAGAGACCGGAGATCCAGGTAAAACTTGGCCTTACTGGTTCCACAAGATGGATAATTTCAATACTCTCGGAAATTTTGTTCTCCGCCTCAAGACGATGTTCTCCGATAAGCCCGACGTTCCACAGGACGACCTACCCTTCGAAGAGTTCGCCTTCGACGTCATCGTTGGTCCTCCGGTGAAGTTCTCGGTGATGCCGTTGCCTTCTGTGATTAGAGTCGGAGAACTGTTCGACGCGATTCTCAAGTTTTACGATCATTTGGGCAACCCCTCCGAATGCGATACCAACTTCAAAATCGCCATCAAGATCCCAGGTGAAGGAACCGTGTCCATTTCCAAGATTTGTTGTAAGAAAAACAAATATTCTTTGATCGACTGCTGCGTTTCATCCTTTATCGAAGTCGGAGAAGAAAAGAAGAACTTAAAATTGACCTTCCAATGCAACAAAATGGACCGAGTGGTTACGGAAACCAAAATAAGTCCTGGTCCTGTAAACTATATAGATATGGAGGTGCCTGAAAAATTTGAAAATTGTGACACACTAAATATAGTTGTTCATCTATATGATATGGCAGGAAATCTTTCTAGGAATGTTTATAATGCAGTGAAATGTTGTATTGAAGGACAGGAGTACACAGGAGCTCCAACAAGTACAGGTCGTACCATTATTAACTGCAAATTACTAACTTTGAAGAATCCCAACAAACTTGATCACTTTGAAGTCGTTGTCGATGTTGTGGATGCTAAGATCCTGAATCCAATTTCAAAGAAAATTAAACTCCTCAAATCAAATAAAGCTCATCGTCTAATTCTGCAGTGCAAATTCAATAATGAACTTAAAATGACGAATATTCAGAAGAACTCCGTGATCTCTGTTCCAGTTGGTACGACTTTGAGTGACCTTGAACTCTATTCTGAGTCTGAACGTGGAGATATTAGACGTGTCACTTCAGCCGACGGAAAAATCAAGGTGAACTGGGTTGGGAGCAAGGCAAGTGCTGAACAACTTCCTATAATCAAGATCCCAAATGCAGCCAAAGAGAATAAATACATCTTCATCAGTTTATGCTACAACAGCACTCTGACTCTCGAATTCGCATTCAATATCCGCACCATACCCGGACCTATCAGCGATATCCGGTGTATATTCAGTGGCAGTTATTCTGTGAAGCGAGGAGAACATCTCTCAAGTCAGTTGCAAGTTGATCTCTGCGATGCATATGGCAACATCATCGATAAGATGACCCATGAAAATCTCGATCAACTGACCTTATCCGGTGATGGACTACTGGTCAATAAAGTTGTAAAGAGTGTAGGGCAGAAATCTGGTTTTATCCTCACTAATATTCAAATCGATGAGAGTTACCAGTGTGGAATGTATTCCTTTGAAGTGTGTTACGACACCTATAAGAAGTCCATGATTGTGAAGGTTATACCCGGTGATCCCATGTTCATCGAAGTGAAGGGGGTCGAAGTGGATACAGTGTTCAACGTGATCTCCGGCATGCAAACCAAGAACTGCTTGCAATTGCAGATCCTGGACAAGTGGAAAACCAAGTTGCAGATTGAGAACATCAAAATCTACCATTCTCTGACACCTTCGCTGTCGTCTAACATGAAGACTCACTACTTGACTAACAAAAAAGGACAATGTGAAATCGGAAGACCAACTTTCACTGGAACACCTGGGGATTACGATTTATCTTTTAAAGGACTTGAGATTCGGAGGAACATCACAGCTCCTACTCTAAAACTAAAGCTCCATCCTCCGATACCCAAACCCGAATCACTGTATATCGAATATGACTTAAAACATGAGTTCATTGTGGGTCATAGTTTACCAGATTTCCGCGTAAACGTAAAACTGAACAACGGTGAAATTATGCTCCGCAAGGAGTTAAATTTGCACCTCATGAAGTGTAAACTGACTTCTACTAACACTAAAATTAAGAAATTGAATATCAAACCATCTGCAGTTTCACAAGTAGGCGCTTTCATATTTGATGACTACATGCTTAGCAATATTTGCGATAGTTACGTTTTGGAGTTCTCTTATGGTCCTCAAATCACGAAAACTATGAAGATCCAGACGAGATCCGACATTCCCGTTAAGCTCTTTTGCGAGGATTCGCAGTCGATGCCGAGCGTAAATAACGATCCAGCTGCAGCCGGTCGTACGCTGTTAAAAAACAAAACTTTCCATCTGAAGGACGTCCACGGCAACACCTGTACGGACTACCCGGCAACGGAGTTGCACGTCCTCATCGCGGCCTACCCGGAAGAGGAGGATCGCAGGAGGAGTCGGGGCAGCATCACCAGCGGCCTCGACGGCAAGGCTTTCTGCGAGAGTAAATCGGCGAAACTGCCCAGACTCGAGCCGTCCACCCAACTCACCTACCCCGTGAAAGGCGGCGAGTGCATCATCAAGGATATCAAACTGGCCCGCAACACCGAGGGTCAGGACAGTACCCAGTATTACTTGAGCGTGAAATGCGACAAGCTCACGATGAACTACGACTTCCTCTTCTACAATAGCATCGAGACCCAATCCGAGATGGCTAGTCTGAGGAAGACGAGGGACGATTTGCTGCGCGAGGTGGAATCGCAAAAGGAATCCATTAAGAAAAAACAAGATGACCTCGTGGAACAAAGGGCCATCGTGAAAAATCTCTTTCAAACCAAGTCTCGCTGCAAATCTCTTATAAAGAACACCGAATTCATGGTCAAAGACGATCCATCGCAATCGGACTTAAATGAAATGCTGAATGCGCACAAATGTGCAATTGAAAAGTTGGGGAAACGGGAAACTCGCAAGAGTTGTCTTACTCCAATTCACGAAGTCGACGGAATTCTATGCAAAATTGGTCATTTGGCTGAAATTGAACGCAACGATGAAGCTCAAGTGATCTCTTGGCACATGGCCGGAGACATGGATTGTGTAGTCACTAGAACTACTAAACAGGCATTTGAGCTCTACAACCAATCGCAGGGAAATCAGCAACTCCTTCCTTTGGAGTCTATTTTCAAAAAGAACATTGTGTTTCATAAACAAATGCCTCACTTTAACAAAATAGCTGCAAATAAGATTATGGGCAACCCTATGTTCGCCAAGCAATGCTTTCAGTTCCGACGCTACGAGAAAGAAGCTAGAATGGTTTTTGCTATGCTGCTTAATGACACAATAATCATTGATGGTCTGAAGGAAGGGAATGACTATAGAAAAATGTTGCACCAAATTGGAATCTATTGTCCTTGCATAATCACTCGCACCGGTGAAAGGTTGAGAGCAAACGGAAAATTTGGCGGAAAGGGAAATCGCATGCCTAGCAATTACAAAGGACCTCGATTCACTTCTCCTCCTCCTGCGGAGATCTTCCAGCATGAGGCCAGCATAGTGAAAATAAATAAACTGCTGGAGGTTATGGAAAAACATATTTCTGGCCAGAGTCAATTGGAACTACTGGAATCAGAACAAATCGAGGAGTCGGATGAATTTAATATCTGCAATAATAATACAATCTTGTTGAAAGACATTGAAAAGAAACTAGGCATATTGTCGCAGAAAAGTAATTCGACTTTAAACGATTTGGTTTCCGAAACCCCAGCTAAGAAGAGGAAACGCTTCTGA

Transcript

OFRAG00000009580.2

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13589	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036277	Homologous_superfamily	SMCs flexible hinge superfamily	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR038892	Family	Structural maintenance of chromosomes flexible hinge domain-containing protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22640	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0051276	Biological Process	chromosome organization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-