Gene detail

Detailed information of OFRAG00000000607.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000000607.1	SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED	tig00000276	6220	30722	+

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000000607.1

ATGACGAATTTTCTTAAGAATTTGGGTAAGAAGGAGAAAAAGAAGGAGCCAGCAGTTACAATTCCGGTGGTGGATAGCTCTCCTATACCCCTGCGGTCAGTAGTGGTCATCCAGAGGTGGTATCGCCGTTACTTGGAACGATTGGCCGAGCGAAGGGCGCAAACATGGTCAATATTCGAGAACTTGGAATACTCCAATGAACACGATCAGACTAGGCTTTACAATTTCTTCAACGATATGCTTATGCAAGTGGAGTCTGGAACAGATACGGATCTCTTACGTAACCTGGGTATTATTCAACGGCCGACTAACAATACCATGTTGACCGACGTAGACGAAGATGCAGAGCTGTGCAGGGCCACGAACCCCGACGACATCAAGGTCGAGAAGAAGTACAAAGGACTTCACATCAGCATCCCTATTACGAAACCACAGCTACACTCAATGATTACGGCATTCAAACAAAAGAAGGAGATTCATGCCAAATACGTGTTGATGATACTGCACGACGTTCGAAAACAATTGAAGAAACAAAAGAACATCAATAGAATTAGCACTTTGTCCTCGAAACGAATGACAGTTATCGGTGATCTTCATGGCAAGCTAGATGACCTTTTTATAATCTTTTTCAAGAACGGCTTACCCTCAGATGGTAACCCTTACCTGTTCAATGGAGACTTTGTAGATCGTGGCAACGAGTCATTGGAGGTAGTGTTGTTGATATTTTGTACTTATCTGGTTCACCCAAACGCCGTATTCTTTAATCGAGGCAATCACGAGGATTACGTCATGAACCTCAGATATGGTTTCGCAAAAGAAGTAATGACAAAACACACGAAAAATGCCGGCAAGATAGTGCGACTGTTTCAGGACGTCTTCAGTTGGTTGCCATTGGTTGCAATCATAGACCAGAAGGTGTGGGTATCTCATGGCGGCATATCAGACCAAACCAGTATATCTTACATTGAGAAGATCAACCGTCATAAGTACCTTTCCATTCTGAGACCTCCAGTAGATGAAGATGAAAACGGAGTAGAGACAGTGGATGGAGAGGAGTGGAGACAGTTGCTGGACCTGCTTTGGTCGGATCCGAAGTCCGCTAATGGGTGTACGGCTAATAACTTTCGCGGAGGTGGCGTCAACTGGGGTCCGGATATTACAAAGGCTTTCTTGAAACTCAACAAACTCAGTCTGATCATTCGATCTCACGAGTGCAAACAGGAGGGCTTCGAGTACACGCACGACGATCAGGTGTTGACTTTATTTTCCTCTTCCAATTACTATGAAGTGGGCAGCAATAAAGGAGCCTTTGCCCAACTCATCGGAGATCTCAAGCCAAACATCATCCAGTACATCCACGTGGCGAGCAACTCGGACAGAAGGATGACCATCAAACAGAGAGTTAATACGGTTGAAGATTCTGCAATTAAAGGACTTCGAAAAAAGATTATGGCCCATCAATCACAATTGGTGTCAGAGTTCAGAAAAGAAGACATCGATAAGAAAGGAGACATAAAGGTGTTGGTTTGGTGTAAGGTTATGGGCGAAGTACTAGCAATGGAATTGCCTTGGAGAAGTCTGGCGTCTAGATTAACGAAAGTTGAAAACAATAACGTTCACTACATGTCAATGTTTGACGACTCGAGACTGGAACTTGACATTGCAAACATCGACGAGCATACAAGGCAATCATTTACCGAGACAATGTACCGGAATAGAGATAACCTTGAAACTATATTCCGTGCAATAGATAAAGATAACTCAGGTCGTATTTCAATGGAAGAGTTTAGTGAAAGTTGTTCTATTCTGGCCCGACACACGGGCCAAATGCTGTCCAAAAAGGATATTCGAAGCATGGCTCAAGCCATAGACATCAACAAAGATGGTCAGATCGACTTCAACGAGTTTCTAGAAGCATTTCGCATCGTCGACAACGAGATGGCGGGAAAAGAAAACCAACTAGCGCGTTCGAACAGTAGTTGTGCCGAGCTGAGGAATGCTTCTCTTAAGAAAACCGCCATGGATCACTAG

Transcript

OFRAG00000000607.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00149	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan
PF08321	PPP5	PPP5 TPR repeat region	Repeat	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002048	Domain	EF-hand domain	Interproscan
IPR004843	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR006186	Domain	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR012008	Family	Serine/threonine-protein phosphatase with EF-hands	Interproscan
IPR013235	Domain	PPP domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR029052	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR051134	Family	Protein Phosphatase PPP	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45668	SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004721	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0030145	Molecular Function	manganese ion binding	Interproscan
GO:0050906	Biological Process	detection of stimulus involved in sensory perception	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-