Gene detail

Detailed information of OFRAG00000000295.1 in Osedax frankpressi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OFRAG00000000295.1	DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL	tig00000197	690651	695500	-

Gene Structure

More details in Jbrowse Sequence

CDS

OFRAG00000000295.1

ATGATAATAAAATTAGATGCAGATGTAAAAAGTAAGATTCGATCGAGCATGAAAATGACTTCACTGCAATCTTGTATCGTACAACTTCTTTACAATGCTTTAGATGCGGATTGCACTATTGTAACCTTAAAGTTTGATTTAACATCCAGTACTGTCTGCTGCACAGATAATGGTAGCGGTATAGAACTTCAAGATTTCAAGCATATTGGTCATAGGTATCATACCAGCAAGCATGGTGTCTGCAGAAGAAACAGATACTTTGGCTATACCGGAGAATCATTAGCTAACATGCGTCAAGTTTGCCGGGAACTTCGAGTGATTTCGAATTCAACCATTCATCCTCGTCACGGTGTAGAGAAGGTCATGAGGAATGCACGCGATTCTATTCTTTCTAAAACTGAGTGCCCATTAGTGAGAAATTTATTTTTTGATATGAACACTAGGAGAAATTCCATAAATATGGACAATGAATTACTAAATATTTGTGATAAATTAACAGAGATATCGACTATACGACCATATTTGGAATTGACTTTACAACAAAATCATTCTGTAATATGGAATTGCAAAAACAGTAATTCAATTAGGAGTGCTTTTTCGAAAAATTATAACTTATCGGAGTTGAAACATATTGTTGATGAAGAGGATGCCATTTATGGAATTCGAGCCTTGTTTTCAATTGTTCCATGTCCGTCGAATAAGTCACAATTAGTATTTGTTAATTTCCATTGTATTAATAGGGATAATTTAATACAGAAATTAATCAATAAGTGGTTTACGAAAGTAAATTTATTCAAGAAAGATGATACCAATAAAAAATCTGAAAATCATGCGTCTTACTTGGTTATGGTAACATGCGATCGACAACAAGTGGATTTCGCGGATGACCCGTCGAGCGACATTACTTTCAGGCGTCAGTTTGACTTCGAGTTTTGCCTCCGTCGTTGCGTTGACACATTCTTAAAGGAACAGGGAATCAAGTGTGTTTGTTTAAATTCGCCGTTGCCACGTGTAAGCCAGGATGACCAATTGACTTTGATACCGCTGGATGGAGATAAAAATAGATTTGATTATGCAATATCTACAAGGATTTTCACTAGAACTCTAAGTTCAAATACGGCTAGGAAAACTCCTAAAAAGTTTGAAAGAAATATTGATCCATCTTTTCAACAATATTCTATCAATAGTCATGAAAATGCTTTGAAAACTAGTTCTGTAAAAAATACAATTTCGTTACCAGTAAACACTTCACCATTAATGGATAAATGTGGTATATCTAATCATTCTTTAGACAAAGACTCCTCGAGTATAATGATAGAAAAGACTTCTATAACGGAACCAAATTTCAAAGGAACTCAGAATCATCGTAACATTCAAAATCAGTTTAAATGTAGCCAAGATGTCGTAATAAAGAATAGTAACAAAATGGCAAGAGGGACGAGTTCTATACACTCACCTTCAGGTTGTATAGACGACAATCTGCTGCATGTTAGCGGCTCTCTAGAAAGTGTTAAGGAATGTATGAATTCGGAAACAAATCCGGATATTCACAAATATTTAGCGATGTGGTGGAATTTATTCGACAAACTTATCGAGAAGAAGTTTAATCGCGATGAGAATCTTGTATTCAATTACGTGAAAGATGATATTTGTAAGAGAGAATACAAAGATATACCGCATGAATTGACAACAATGGTTCATCGTGATAACAAAGGATATTCTGTACCCTTCTGTGCCGATATTCAAACCGATGTCGTAAATTCAAATGAAGAACATTTTATTGAGAAATTCGATCATAATTTTAGTCAGATTTCTAATAAAAGTGAAAATAATTCCAGAATTGAAAACATCGACGAATCTGACGTCAGCTCAGAATTTATCCAAAGTGATCATAATCTCGAATTTACTAAAGAATCACAAACTGATCCTATTATAAAAACTAATATTGTTACTAGGCGTCCCGAAGAGCTATTAAAACAATCTACGGACAGTAATGATGATGTACGACAAATTCTAAACAAAGTCACCGAAACCATTACAAATATTAATAAAAGTGAGTTGGAAAATGCTGAATCAGATAAATATATAGAAAAATGCGATGAACAAATTTATGATTACGGTAATTCTTCTAGTTGCGCTAATCTTGAAAGAAACAATGAAAACAACAATATGGGTGACACGCCTATCATGAATTCATTATCCATAGAAAAAACTGTTAATTCTAACGAAGAAAAAAATGATGAGTTTGAATATATTGAGATATCTTTAGAGGATTTAAAGATATTAGATGCTCCTGTTTTGCCAAGTGGTTGGGAAAGAATTGTTCAAGATAACGGTAAAATTATTTTCTTAAATAAAAAATCTGGTTTATCATCGTATTCAAGACCGAGCGTTGAAAAAACCATACAAATCAAGTTATCAATTATATTAATCTGA

Transcript

OFRAG00000000295.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13589	HATPase_c_3	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202	Domain	WW domain	Interproscan
IPR036890	Homologous_superfamily	Histidine kinase/HSP90-like ATPase superfamily	Interproscan
IPR038973	Family	DNA mismatch repair protein MutL/Mlh/Pms-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10073	DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006298	Biological Process	mismatch repair	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0032300	Cellular Component	mismatch repair complex	Interproscan
GO:0140664	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-