Gene detail

Detailed information of OALVG00000035125.1 in Oasisia alvinae Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OALVG00000035125.1	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	tig00090458	1558	12443	+

Gene Structure

More details in Jbrowse Sequence

CDS

OALVG00000035125.1

ATGTTGGGTGATGTTATGGAGCTGGTGTCCCTCCAGTCCCATCCCATAATACCACATCGACTGAAGATGGGTCTCGTGACCCTCCTTGACCCCTACGATCGCGTGCACGGTCGTGACTGGCGCCTCCTGGCGAGTGAACTGGGACTCGATGACAAGATTCACTTCTTGGAGAGCAAACCGAATCCGACGGAACTCCTCCTGAGGAATTGGGAGGCGAGGAGTGAGACTCTTGTGACGCTCTCCACACTGCTGCGGAGGCTGGGACGAGAGGATGCTGCGGTGTTGGTGGAGAGCTACATCAGTTCAACCACTGGGAAGACACAGGAGGGAAGCCAAGTCGTACCATCCCCTTGTGATGTAGGTGTCGTTTCACCGCACTACAGAATCCCTGAGAAGTTAAAACTGTACCTTTCGTTGCTGCTCGATCCTGTTGATCCGGTGTCCGGGCACGACTGGCGCCACCTGGCGAGTAACTTGGGCTTCGATGATAAAATCAACTACATGAGGTCGAGGGGCAATCCGACCCACCAGCTGCTTGCTGTGTGCGAGTCACGCCGTGTTGACATGTTGACCTTGGCGGCCATGATGAGGTCAATGGGTCGAGAGGACGCAGCCAAGGTCATAGAGCAGTACAATGGCCAAGACAGACTGACTAACTGCGAGGCTGGCTGTGAATCGGTAGTGGATAAAACAGTAAAAGACAAGACATCCACAACACGACTCAACACGGGAGGACCCTCTTCAACTTGTTATGAGGGTGGCCAGTCAGTCACACAACTCTACAACACCCTCATCCTCAGTTCCCTCTTCAACTTGTTACTGAGGGTGGCCAGTCAGTCACACAACTCTACAACACCCTCAATCCTCAGGACCCTCTTCAACTTGTTACTGAGGGTGGCCAATCCATCTTCCCCAAGTGATGATGACAATTCGTGGCAGCTGCGGACTGTGGAAGTGTTGGGAGTTCACCGAAGCACGACGTCCGAATATCTTCAGCTGTTCTTTGAGAACCCACGTCGGTCGGGAGGAGGGGAAATTGACGACATCGAATACAACAGCGAACAGGGAGCAGCCATTATCACATTCAAAGATGCACACTGTGCCAGGCGAGTGGTGGAGAGGGAGTCCCTGACAATCCTAGGTGCCAAAGTGAAAGTGAAACTGATGGGGCCATTAGACAAAGATAGGTTTCTCTTGTCTGGAGTGCCACCATCGTCCACCGGAGATGATATCAAGGAGTTCTTCTCCACAGCAAACATTGACAGTAAAATACAACAAGTGATATTTGGTCAACAGTTTGGAGTCGTCATGCTGCAGTTCACCTACCCACCACCAGATTACAGCAGCCTGCGGGAAGTGTGTGCGGCCAGTCACCTGCACGGAGCAGAGATCAGAGTCCACCAAGTGGCCGTGTCTAGAACCATCCAAGTCCACAACATCAGTGACTTCAGCGAGGACTTACTCAGCTTGTACTTTGAGAACAAACGCAGCGGAGGCAGCGAAGTAACACACGTACGGGTGTGTCAGGAAGAGGACTACGCACTCGTTGAAGTAACAGACAGTGCCACTGTTCAGAGCATCCTCGCCGTGAGCAGCCACCAGCTGGAGGGTCGGACACTTCATGTGCAGGAGTACTTCGAGTGCCTGGGTCTGACTCCGACCGACCACGACACGACAAGTCCAGACAGCTGGATCCCTGGCAGTGTGACGGTCACGGGGCTCAAGGCCAACGTCTTGACATACCTTCTCATTTCTCCCGTTTCTTGTGAGAGGGCGGACAAGGAGATGACCAGTGTGGCCACGGTGGTGGAGTGGGGGACATGTGACGATGCGTCCACTAGTGTTGAGTTAAGGTGCAGTCTCACCCACCAGACAGAGGGCGTGTGTCGGCTGGCCAAGACGTGGGGCCAGACAGCAACAACGACCTTCCTGCAGCTAATGGACACTTTGCAGGAAGAAATGAACTGTCAGTTAATATGTCACCAGGTCTGGGTCTAA

Transcript

OALVG00000035125.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR034464	Domain	PARP-10, RNA recognition motif 1 and 2	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR052056	Family	Mono-ADP-ribosyltransferase ARTD/PARP	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14453	PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003714	Molecular Function	transcription corepressor activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003950	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0010629	Biological Process	negative regulation of gene expression	Interproscan
GO:0070212	Biological Process	protein poly-ADP-ribosylation	Interproscan
GO:0140289	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-