Gene detail

Detailed information of OALVG00000034443.1 in Oasisia alvinae Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OALVG00000034443.1	CRUMBS FAMILY MEMBER	tig00090242	287913	354371	-

Gene Structure

More details in Jbrowse Sequence

CDS

OALVG00000034443.1

ATGCACCTCACCGAGTTCTCACATGTTTTTCGTGGGTCAACGTTAACGACACCGCACAGAAAGGAGGCGACCTCAAGTCGAGTCAACCATACGACCATGGCCGGGAGTTTCAGGCAATTGAAAATCGTCATTTGTGCTGTACTACTCTACTACACACCTGTTAATGGCGGCTGGAACGAATGGTCATCGTGGTCATCCTGCTCTTACTCATGCGGCGGAGGATCGCAGAAAAAGGTTCGGTTGTGCAACGAAACTTCTGCCACGAACGGAGGTCTCGAGTGTTCTGGCCAGCCAGAAGAATTTCGTCCTTGCAACGAACAGCTTTGTCCAATTACAACGACCGGGTGTTACAGCACGATGCTTAACCTCAAATGTCCTTTCGACACACTAATTGATGTCAACAACACCATGTTCGGGCGCCAGAACGACGAGACATGTCCAGGTGCTCCTGCTGGAACGAAGTGTGAAATAGACATGCAAGACTACGTGGTGACGAGATGCGAGAACAAGATGATGTGCGACATAGCGGTGCCGAAGAGACCCGCTGGTGTCACCGAGTGTGCATCGATACCCAAACAAATGTATCTTCAAGTCACCTACAGTTGTTACAAGATCGACCAGTGCGCCAGCAACCCTTGCCAGAACTTAGGCACGTGTGTGGACGGGGTACAGCGGTACACTTGTTCCTGCCCTCCTGGGTACACAGGCTCGAACTGCGAGCGAGACACACATGTTAATGGCGGCTGTTGTAAGTGGTCATCGTGGTCATCGTGGTCATCCTGCTCTTACTCATGCGGTGGAGGATCGCAGAAAAAGGATCGTTTGTGCAACGAACCTTCTGCCGCGAACGGAGGTCTCGAGTGTTCTGGCCAGCCAGAAGAATTTCGTCCTTGCAACGAACAGCTTTGTCCAATTACAACGACCGGGTGTTACAGCACGATGCTTAACCTCAAATGTCCTTTCGACACACTAATTGATGTCAACAACACCATGTTCGGTCGCCAGAACGACGAGACATGTCCAGGTGGTCCTGCTGGAACGAAGTGTGAAATAGACATGCAAGACTACGTGGTGACGAGATGCGAGAACAAGATGATGTGCGACATAGCGGTGCCGAAGAGACCCGCTGGTGTCACCGAGTGTGCATCGATACCCAAACAAATGTATCTTCAAGTCACCTACAGTTGTTACAAGATCGACCAGTGTGCCAGCAACCCTTGCCAGAACTTAGGCACGTGTGTGGACGGGGTACAGCGGTACACTTGTTCCTGCCCTCCTGGGTACACAGGCTCGAACTGCGAGCGAGACACACATGTTAATGGCGGCTGTTGTAAGTGGTCATCGTGGTCATCGTGGTCATCCTGCTCTTACTCATGCGGTGGAGGATCGCAGAAAAAGGATCGTTTGTGCAACGAACCTTCTGCCGCGAACGGAGGTCTCGAGTGTTCTGGCCAGCCAGAAGAATTTCGTCCTTGCAACGAACAGCTTTGTCCAATTACAACGACCGGGTGTTACAGCACGATGCTTAACCTCAAATGTCCTTTCGACACACTAATTGATGTCAACAACACCATGTTCGGGCGCCAGAACGACGAGACATGTCCAGGTGCTCCTGCTGGAGCGAAGTGTGAAATAGACATGCAAGACTACGAGGTGACGAGATGCGAGAACAAGATGATGTGCGACATAGCGGTGCCGAAGAGACCCGCTGGTGTCACCGAGTGTGCATCGATACCCAAACAAATGTATCTTCAAGTCACCTACAGTTGTTACAAGATCGACCAGTGTGCCAGCAACCCTTGCCAGAACTTAGGCACGTGTGTGGACGGGGTACAGCGGTACACTTGTTCCTGCCCTCCTGGGTACACAGGCTCGAACTGCGAGCGAGACGTTGACGAGTGCAGCAGCTATCCATGCAGTAATGGTGCGACATGTAATGATGGAATTAACACATACATTTGCAACTGCGCTACTGGATATACGGGTGTCCGTTGCGAAACAGACGTTGATGAGTGCAACAGCTATCCTTGTAATAATGGTGCGACATGTACTGAAGGCGTGAACACATACATTTGCAACTGCGCTACTGGATATACGGGTGTCAATTGCGAAACAGACGTTGACGACTGCAAAGACAAGCCATGCCAGAATGGTGCGACATGTACTGACGGCATGGACACATACATGTGCAACTGCTCTACTGGATATACGGGTATCAACTGCGAAACAGACATCGATGACTGCAAAGACAGCCCATGCCAGAATGGCGGGACATGTATTGATGGAGTGGATACGTATACTTGCAAATGCGCTAATGGATACACCGAAGATAATTGCGATACAAACATCGACGACTGCAAAGACAGCCCATGCCAGAATGGCGGGACATGTATTGATGGAGTGGACACGTATACTTGCAAATGCGCTAATGGATACACCGAAGATAATTGCGAAAGAAATATAGACGACTGCCAAAGCAAACCATGCATGAATGGCGGGACTTGTGCTGATGGAGTGAACAAGTATACTTGTAAATGCGCGACTGGTTACATGGGAGTCAACTGTGAAAGCCGTGGTAAAGCACCGGTCATATCTTCAAAGAAGAAGCAGACATACAGCGAGTCGATGAGGGTGGTCCTTGTCATTGTGTGTCTGGTGCTTACCGTCGTGTTTATTGCACTGGTCGTAATCGTTGCTATCAAGGTCAAACAAGCAATCTTCATCCATCCCGTGCCAATGTCCGTTAACGCCTAG

Transcript

OALVG00000034443.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF02140	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR000922	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR043159	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR051022	Family	Notch Signaling and Cell Fate Determination	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24049	CRUMBS FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007157	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0032991	Cellular Component	protein-containing complex	Interproscan
GO:0045197	Biological Process	establishment or maintenance of epithelial cell apical/basal polarity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-