Gene detail

Detailed information of OALVG00000031994.1 in Oasisia alvinae Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OALVG00000031994.1	NOTCH LIGAND FAMILY MEMBER	tig00015159	144450	187625	-

Gene Structure

More details in Jbrowse Sequence

CDS

OALVG00000031994.1

TTGTTTGACTTCTGCCCTAGGACGCGCGCCGCTGCATCAGTTGGCAAACGTTCCTGCAGCAGGAAGCGAGCGGCACAGTTTTCGTTCCGCGTGGCTGCGTCGACGTCTTCACGTGCTCGCTACCTCCGATCCTCTCGTCTCGCGCGGCGTCGCCTCGATCAGCGCACCCGGCTCTCATCCGCCGATCCGAGCCGAGCGTCGATAAGCGCCGCTAATGTGATTACGTTCGTCTTCGAGCGGTTTAACAGCGGCAGGAGTTCGATATTACGACGTGTATTAGTGGCCGCCTTTGACGTTCGTGCGAAGTGTCTTTCATCGGTCCGGATGACGAGTGCACCATCGATTGCGACCATGGCCGTTTTCCTGGGATGTTTGCTGTTGCTGCTCTCTAAAGCGGAAGGTGTGTTGGGCGAGCCCCCGAGTGCCCGTTCCCTGTGGGCGCGGGACGTGGCTCCCGGTGTGGTCCACACGGTGCGACTGTCCGAGGCTGCCCCTCATGGCACCAACGTCTACAGGGTACAGCCCGACTCCCTCGGCGAGGCGACAGGACAGCGGTCAGTCCGGCTGAGGCTGGTTGGACCGGACGAACAACTGTTTCGACTGGCCGACAACACCGTGAAGGTGGATGAATTTCCCTGCATCAGCCGCATCCCGGGCGAGTTGTATGACGTCACAGTCGAGGCCCTCTCCACCGTGTCCGGCGAGATGCTCACGCAAGTTCATCTGAAGATCATCGTGGCCGAGAAAAACCAGTTTGCTCCGAAGTTTGAGCGCGACAGCTACACAGCAGAGGTGGGTAGTGAGGACAGCTACACGGCAGAGGTGTTCCGCTACAGTGACCCGGGCACTCACGTCCTCGCCCTCCGCGCCACCGACTTCGACACGGAGGCACACAACAGGGACGTGTCGTACGTCCTCGAGGAGGGCGATAATGAGGGAGCCGTGGTGCTCGACGGGAGCTCAGGCGAGCTGACGGTCGCCGACGGATTGCGCAAGGCGAAGACGAGGCTGGTGCTGTACGCGACCGCCACCGACCACGGGTCGCCTCGGCTGCAGGACAGAGCCAACGTCACACTGCACGTGCGCAACATATCAGAGCCACGCAACGTCAGCATCGAAACGTTGAATGTGACGACGGCCGTTGCGTGTTGGTTTCGACCAAGTTACGGCAAGGCAAGGAAATTCGAGATTCGGTATTCTTCAAAAGAAACCTCATTCGAAAAGCGAGTGACGATACACCACAAACCTAAACGGCGCCAGTGCATGCGTTTGGTGAACCTCGACCCCGGCGCCAAATATGACGTAGAAGTTCGCGCCCAAAGCGGACACCACCAGCTGGGAATGCCGGTGAAAATAACATTCAAGATGCCCACCAAGTCTGAAATAACGGTGTGTCCGTCCACGGCCTGTGCGGGCGGCCTGTGCGTGGCCAGTTCCTCTCCGCCCGGCTACAAGTGTCTGTGTCCGGACGGTCAGACGCGAGACCACTGCCGCCGGAGTCCGACCCCCTGTAGAGGTCCCTCGTGCGTCACCAACAACCACGCCCCGTGCTCCTGCGACGACATAGCGCGAGACGACGTCAGCGCATGCGCGCAGCGATGTCGGTCAGAGGTCACGCAATGTCAGAATGGCGGCGCGAGGATCGTGGACGGCGCGGGCGCGGGGACGTGTAAGTGCCCGCGCGGCTTCTACGGCGGCGTGTGTCAGCACTTCGACCCGTGCTCCGAGGCGGAGTGCGGCAACGGCGCCACCTGCCGGAACACGTCGTCATCGACGTACAAGTGCCTCTGTCCGGACGGCTACTACGGCGCCACCTGCCAGCACTTCGACCCGTGCTCGACGAACCCGTGCGACAACGGCGGCCTCTGCCGGAGTCTGTCGGAGGCGACGTACAGCTGTCGGTGCGACCGCGGTTACTACGGCGACAACTGCACGCGCTTCGATCCGTGCTCGTCGGCGCCGTGTCAGAACGACGCCCTCTGCCGGAATGTCAGCGACGACGACTTCAAGTGTGTCTGTCGGCCTGGCTTCGTCGGCTACGACTGCGGCACCTACCAGCCGTGCGGCGAGCAGTCGCCGTGTCTGTACGGCGGCTTCTGCAACAGCGTCGACGGCTCGTTCTTCTGCGACTGCCCCCACGGCCGCTACGGGCGGCGATGCGAGCACATCAACCTGTGCCAGCAGCTCCAGCCGTGCCGCGAGCACACTGTCGGCTGTCGCAACACGTCCGACTCCACCTTCGCCTGCCTCTGTGAACTCGGCTGGACGGGCGACGACTGCGCCACGTACGACCCGTGCTCCGGCGGACCGTGCCTCAACGGCGGCTCCTGCCGGCAGACGTCGGCGCTGACGTACGAGTGCGCGTGCGCCGAGCCGCACTACGGCGCCAACTGCGAGACGACGGACCACTGCGCGAGCGCGCCGTGCGAGAACGGCGGCACGTGCGTCGACCTGACGCCCGGCGACTACGCGTGCGTGTGCGCGGACGGGTTCACGGGGAAGACGTGCGACGTGTACGACGCGTGCCTCGCCGTCGACTGTCTGAACGGCGGCCGGTGCGAACAGACGGACGACGGCCACCTGTGTCGCTGTCCGGTCGCCTACTTCGGCGACATGTGTCAGTACTACAACACGTGTCACACGGAGCCGTGTCACCATGGCAGGTGTCGCGTGGCTGGCGACGGCGACTTTAGCTGTGAGTGCGCGGAAGGTTACTACGGGATGCTGTGTGAACTACGCACGCCGTGTTCCAGCGCACCTTGTCAGAACGACGGCGACTGCACGGCGGCGACGGACGACTCCTTCGAGTGCACGTGCGCGGGCCACTACTACGGCGCCCTCTGCGAGGAGTACGACGCGTGCCACAGCGCCCCCTGTCGGGTGGGCCTGTGCACGAACGTGCCGGGCGGCGACTTCCACTGCGCGTGCCCGCGCGGCCTGTTCGGGCGCACGTGCGAGAGCACGGACCCGTGCGCCGAGCGGCCGTGCCACGCGCAGGCCACGTGCATCTCCGTGCTCGGCTTCAACTACACGTGCCGCTGTCCGCGAGGCTTCTACGGCCGCCACTGCGAGCGCTTCGACGCGTGCGTCACGAAGGTGTGCCAGCACGGCGGCCAGTGCGTCGCGGGCGAGTGTCGGTGCGCGCTCGGCTACCAGGGCGAGAGGTGCGAGCTGGCGGCGCCGTGCCACGACCAGGGCAAGCCGTGTCTGAACGGCGGCCTGTGTCTCAACGACAACAACGGCACCGTCTTCTGCGAGTGCACCTTCGGATACTTCGGCGACCGCTGCGAGAGGTACGACCCGTGTTCGGGGTCTCGGGCGTGCGAGAACGGCGGTTCGTGCGTCAACCAGGACCCCGAGCTACACGTGTGCGTCTGCCAGTCCGGCTTCTTCGGTCGGCGGTGCGAGAAGCACGTGCCGTGCGAGGTGAGCTCGTGCGAGAACAACGGCACGTGCGTGAACACGATCGACGGCGACGCGTGCTACTGTCCGCCCGGCTTCACAGGAGAACGCTGTGAGAACGACATCAACGACTGTCTATTCATCGACTGCTTCAACGACGGTTCCTGCATCGACCTTCCCGGAAACTTTCGTTGCGTCTGCGCACTCGGCTTTACCGGAAGACACTGCGAAAAGCCAGCGATGTGCCCAGAGGAAGTGACGTACGAGGCGAAGGGCACGTACGAGTGGCCTGAGACGGTCCACTACAGCGACGCTGTGCTCGAGTGTTCCCGGGGCGTCAGTGCAGTCGCCACCAGGAGCTGTGTGCTTGACGGCGAGGGCCGCGCTGTCTGGGAGCCGCCCAACACCAGCCGCTGTGACATGACTATTCAAACACCAGACGAGGCGGAGGACATCTTAGAGCCGTATCAAAACGGCACACAGAGTTTACAGGATGCTCGCCAGGTGGCAGCAACTGTTGCTCTGCTTGAAGCTGTGTTGCCTTTCTCTTACGACTACTATACGATCGCGTCCTACGTGATGGACATCGTGGAGCAGATACTCGAGGTCCCGTTTGATGTGATTGCTGAGAGTGGAGTCGGTCAAAGAATAATGAAGATGCTTGAAAGATTCGCGCACCACATTGAACTTGAAGACCATCAATACTCCGCGGTGCGAGAGAATTTCGAACTAAAAGTATTGCGCATCACGTGGCAAGAACATGACATGGGCTGTCGCTTCGTGCCACAGAAAGCGAAATCATCCGCCTACATGCAAATACCACCTGAGGCGTTTCAAAGAGACCCGTCACTCGAGCGTGTCACGTTTCTCTGGTTCAAGACGAGCAAGTTGTATAATACACCGGATGACCCTTGGCGGGACATTGGCAACGTCATATCCGCCGACTTAAAGGGCGCGCACGTCAAGGATTTGCAGACATGTGTCGAGTATTCGTTGGCCAATTTACGGGTATCGTCTCTCAATCGCTGCGTTTTCTGGAATACGAAAGACCAGGCCTGGTCGCCACAAGGAGTCGTCACTCTCTCGTATCGAGGGGCAACGACCACGTGCTGTTCAAGTCACATGACCAGTTTCGCTATATCAACTGACCCGGACGTGGCGGCCGTGAGTCTCGTGCAGTCCGACATCTACCTGCGGGCGACTGCCCACGTGTGTGTCGGCATCGCCATCGCCTCCCTCTCCGTCGTCGTCGTCATCTACACCTTCTTCAGATTCCTCAACAGAGAGAAATACGGCCAGACCGTGCTGCTGCTGACGTCAGCCATCCTCATGACAGACCTTAGCCTCCTTCTCACCAATGAACGGTCCCGCGTCTCCTCCGACGGCGCATGCGTCGCAATGGCCATGTTCCGGCACTTCGCCATCTTGCATCAGTTGCTCGCCGTCACCGTCTACGCTCGTCACATCGTGTCGGCCATCACCGACCGATCTGACGGCGATCACGTGACCAACAAACACTTCCTGTTAAAAGGGGCTTTGTTGGCTTACGGAATGCCGCTAGTTCTTGTGATTATATCGGCCTGTGTCGACACTGGCGCCTACGTCTCCGATGAGCATAGTTGTCGTCTTGGCTCAACGAATCTCTACATTTACGTATCTGCCTACGTCACGCCAGCGTGTCTGACATTGCTCGCAAATTGTTGCCTCGCTGTATTAATCATCCGGGCACTTCTGACGTCACATTCCCGCAAGCCGCACGATTATACCATTAGCGATGGACAGGTATACGTGTCCCTCGTGATCATATCGGAAACGAGCGTCACGTGGATCATGGGAGTGATATCGTCGCGCCACCTGGTGGAGACCCACCAGTTCTACGTGACGTGCTGCTACTTCGCCCTGAGGGCCTTCCTCGGCGCCTCCGCCCTCGTCTGCTTCTGCCTTCTCAACCCGGACGCGCGCGCCGTCTGGCGGCAGCTGTGTCGTCGCTCGACGGGCACTCTGACGCGTCGAACGCAGTATCCGCCAGGCGGCACTGCGATCACTTACAAGACGCCGGCGTCGCCGCGCGGTCGTTACGTGAACGACTACACGCTCGTGATAGATAGCACCAACGGTCTGCCGCGGAATCTGATGCCCGGGGATCGACTTTCTGGCGTGCCGACCATCTGCATCAATGGCCGCCGGACGCCATCGATGGCGTCCATGGTGATGGGTGATGACGACGACGTCAGCCAGAGGGCGCCATCAGTACCGTGCTCGAGAAGTGGGTCGACGTCGGAGTTCGGTTCGCGCATTGGCTCCTTCAAGCCCACGTGCGCGTTCGAGAGGACAGACGCAACGGACAACAGGGAAATGTAA

Transcript

OALVG00000031994.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF00028	Cadherin	Cadherin domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000832	Family	GPCR, family 2, secretin-like	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR017981	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan
IPR050906	Family	Notch signaling pathway	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004888	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005112	Molecular Function	Notch binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007166	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-