Gene detail

Detailed information of OALVG00000006357.1 in Oasisia alvinae Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OALVG00000006357.1	SLIT HOMOLOG	tig00000460	841156	895496	-

Gene Structure

More details in Jbrowse Sequence

CDS

OALVG00000006357.1

ATGGACACAGACGACGGCGTTTGTGTCGAGACGAACGGGGAACTGGGTCAGAACCAGGAAGATGCTGCCAGCAAGACCAGCGTGGAGCCTGATGAGAAACAGGAAGATGGGGAGGACAAGAACGAGAGTGAACAAGAAGAGAAACCAGATTACACTTATGCCAACTTCCCAGTCAAGCCTGAAGAGAACCAGGAAGATGCTGCCAGCAAGACCAGCGTGGAGCCTGATGAGAAGGTGGACAGCCATTACGTGGACCTGCTGAATGTGGGAACTGACAAGAAAGAGGATGATGGGAATGACAGCGACAGGGACAAAAAGGAAATAACAGAAACAAGCTTTGTGAAGGAAGGTGCATATGACAACAACTTCTCAATGAAGAAACAGGAAGACGACTATGCTGAAATTGATCTGTCTACAGCACCGGTTGAGGAGACTTCACACAGCCGTCCGGCCAATGACTATGTGGATGACTTCGGCCAGCCGAGTCGTCCGCTGAAGGAGAAGTTTGCAATGATTCTGCCGTCCAAGCCTGGGCTCTACAGGAGCATGTCCAGACAGAAGTCTGAGTCCAACTCCTGCTCCAATCGACGTCTGGTGTTTGTGGGCAGCCTCGTCGCTCTTGTCGTCATTGCCGTCCTACTGGGGGTCATCATTTACCTTGTTGCTCGGCCTTCATCCACAGATTCTGACACTACAGAGACTTTCATTGCAACAGTGACACTAGACGGAAAGGATTATGACCCGGCCACTTATGGAAACCCAAACTCAAAGGAATACAAACAAATGAAGGAAGACTTCTGTAACAAAACCAGACAGGCACTGTCAGTGGGACAACTTGACAAATATTTGAAGAAATGCAACGTGACAGGGTTTAGCAAGGGCTCTCTGGTCGTACACTTCGAGCTTGTCGCTGTCCTGTCAGGAGAGACAACGAAGGAATCGTTCCAGCAACGTCTACAGGAGGAACTCGGGAAAGCGGATGGTCTGTTCCACACCTACATCAACGACCCAACCACAGCAAAACTGACAATGGAGCCTCGCTCAGAACACACCACAACCACGGAGAAACCTGTCCACGCGACAACTACTAAATCTATAGTAACCACTACAACAGATGCCATGACAACACAAGCAGCCTGTCCCTCGGACTGTGACCACTGTGGAGATGCTGAGGCTGGGAAGTGTGACTCTGATGGCTGCCCCTCTGGCTACAGATACATGGCTGACACACAGTTGTGTGAGGCTTGTCCCACCCACTGTGACCATTGTGGAAATGCTACGGTTGGACAGTGTGACTCCGATGGCTGCGCCTATGGCTATGTCTACAATGTGACAGGCTCCATGTGTCAACCTTGTCCCACCCACTGTGACCACTGTGGACATGCTGAAGTTGGCCAGTGTGACTCGGAGGGCTGTGCTTCTGGCTACGACTACAACACAGGCACCAAGTTATGTCACACTTGTCCCACCCACTGTGACCACTGTGGACAGGCTGAAGTTGGCCAGTGTGACTCAGATGGCTGTGTTTCTGGCTACGACTACAACACAGGCACCAAGTTGTGTCACACTTGTCCCACAAACTGTCATCACTGTGGAAATGCTGAAGTTGGCCAGTGTGACTCGGATGGCTGTGCTTCTGGCTATGTCTACAACACAGCCAGCAAGTTGTGTAAACGGAGTCCATATTGTGACCGTCACAATCCGTGTGAACACGGTGGAACCTGTATCAGCAAGGGTCCAGACAACTATATCTGCATGTGTCCGAAATGTGGATGTTCCAGCGAGCCGCCGTTACCTAATTGTGCTATAGATAAAACCACTATATGTGGAGAGAACAAATTTCTTCGCAATGAAAACCTCCTCGATCATCCGTACAACTGCACAATGTTCATAACTTGCAATATGGACCACACGTTCAGTAGTGAAAGTTATGTGTGGTCGTATAAAGATGGACAACATGTGTTCTTCCGGGCTGAGAATCGATCTGCATGGGATTACGAGAAGGGTGTAGAATTGTGTAAACAAATACCTCGCAGGCAGTGTGCACAAGAGGAATGTTTGCATGGTGCGACATGTGATGACACTCTCAGTGGTTTCGTGTGTAAATGTGCACCTGGCTATAAAGGAATGCATTGTGAGACCCGACTGATTCCATGTGTCGAACTACCAACGTGTGATCATGGAGTGTGTGTAGCAGACATGGACACAGGGTCTCACTGTGAATGTAACCCTGGCTACCGCGGGCCTCAGTGTGACATACGCATCAAGTACTGTGCCAATATCACCTGTTACAATGGTGGCACATGCGAGAACAGGCCCAAGAATGACTCTATATGTGTGTGTACAAAGGACTTCACGGGACCCGACTGTGGAACAAAGATCGTGGACCACTGTGAGACGCATTCGTGTAACTTAAACTACACCGTGTGTAAGAACAACCCAGACATGGCTAATGGCTATGAGTGTCTGTGCAAGTCGTGCAGTTGTTCCACCGTAGTCCAGTTCAACCAATGGTGCTTAGTGGATCCGACACAAGAATGTCGTAAAGCAAGGTCAAATCCAAAATATTCTGGACGGAACCAGTTCTACATATCTCATCCTTACAACTGTGAATGGTACATCTGGTGCTTCAGTGACGGCGCTCGTGGAAACAACATGAAATGTGCTCCTCCAACTCGCTTCAACCCAGACTACAAAACTACTACAGATTATTGCCTCTCCCCAGTCAAAATGTCGCATTGCACAGAGACTTGTCCTGGGGAAGTGGACGATAAGTGCCCCTCTAACTAG

Transcript

OALVG00000006357.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008	EGF	EGF-like domain	Domain	Interproscan
PF01390	SEA	SEA domain	Family	Interproscan
PF12661	hEGF	Human growth factor-like EGF	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000082	Domain	SEA domain	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR013032	Conserved_site	EGF-like, conserved site	Interproscan
IPR036364	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR051355	Family	Notch and Slit guidance protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45836	SLIT HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0008201	Molecular Function	heparin binding	Interproscan
GO:0048495	Molecular Function	Roundabout binding	Interproscan
GO:0050919	Biological Process	negative chemotaxis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-