Gene detail

Detailed information of OALVG00000006049.1 in Oasisia alvinae Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
OALVG00000006049.1	NEPHRIN	tig00000447	733875	765987	+

Gene Structure

More details in Jbrowse Sequence

CDS

OALVG00000006049.1

ATGACGTTCGCGAGAGAATTACGCTGCCGAATTTGCGTAAGTCGACCCCGAAATCTCCGCGTGACTCACAACCTCGGTTTTCATACACGTGCAGGGAACCACCCGTTAATCGTACTACATTCATCAACATATTCGGCGACCGTGAGACAGTCGTCACGAGCCATGAGACTGCTGTGTACGACCGCGTGTCTACTGTGGCTGACCTCTCTCGCCCTGCCCGTCAACTCGCTCACCGGCCCACATGTGTGTACGCAGCGACGGACTCGTACCGAGACGTTCATCGGTCGACAAAGAGTGTCTTACCGCGAGAGATACACGACCAGCTGTGGTCCTTTTGGGTGGCGTCGGTGCACCAGACATAGAACAAGATACCGCTTTGTGACGGCGGTTCGAAGTAGGACGGTGGCCTTCGATGCCAAAGTTTGTTGCAACGGCTGGGCCCTAGACACGAGCGGCCAGTCATGCTCAATCCATCATCAGAGTCCGTCGGTGACGTACTGCCCGTCCGACATGACAGTACAAGCAACTGGCCGGACAGCCGACGTCAGGTGGCGCCAGCCACAGTTCAGGGAGCCGTTCAACTTCCGGTTGACGTTGTCGTCGACCTACCCGGCAAACAGGGCAACGCTCACATGGGGGAGCCACCGTATCACGTACACAGCCAGAAGCACCAACAATGGCCGCGAAGTCACATGCCGCTTCACCGTGACGGTAGAACCGCCGTTGTCTGGCCCCCTAATCGATGGTCAAACAAACGGTTCAGTGGTCATTGCGGAGGTGGGCAGACCTCTAACGTTGACCTGCCGAGTTGACTGCAGCAAGCCGCCATTTGACCTTACCTGGACAAAGAAGCAGCATGGCGTTACAATCAACATGGGCGGACGGAACAACACGCAGTTGTGCGGTTTCCAAGATTACCGTAGCGCAGTCAGTACGCTGACATACACACCACGGCTAGAAGACAACAACGCCCTTGTAACCTGTGTTGGCACGATGTCCATATCGAGGCCGAAGCAAGTCAGCAGCGTAAAACTACGTGTTTCATATACGAGACCTCCAGATCTGGTTATGTGCCCGGCAAATATCACAACAGCGGCTGGCGGAGAAGAAACCAACGTGTCTTGGCCAGAGCCGGAATTCTCGGAGTCACTCGGCTTCCAACTAAACGTCACGTCAACGTTCGGCAAGAACACGGTGTCGCTGGGTTGGGGTGAACACAGAGTGGAATACACAGCGAGGAATACGTACAACAACATGGTGACGACATGTGTGTTCTACGTGGAAGTTACACCGCCTGCCGACATGCCGGAGATAGCTGGCTTCAACAACGGGTCGACAGTTTCCGTTCACGTTGGCACTGCGATCACTCTCGTCTGCCGGGCCGACCACGGAGACTCGCCCTACAGACTGACGTGGACCAACGGCTCACAAGAAATACACGACGGAACCAGATACTACACAGAGCCCCACGACTTTCGCAACCTGACCAATGCTGTCAACGAATTGACATTCATGCCGACGCTCGGTGACAACAGCATGACGTTGACCTGCGTAGCCAACAAGTCTGAGCAGGAGAGACTGGAACATGTCTCCGTCACGCTGAACGTTACATACACAACGTCTCCGACTCTTGAGTTCTGTCCCGAGAACCAGACTCTGGAGGCAGCGAGAGGCGAGCTGGTGAACGTGTCCTGGCCGCAACCGGAATTCACGGAGTCACTTGGCTTCCAGCTCCACGTCACGTCAACATTCGGCGCCAACACAACCCACCTGAGCTGGGGCGAACACAGAGTGGAGTACACAGCTAGAAACACATACAACGACAAGGAGACAGCGTGTGTGTTCTACATTGACGTCAGACCACCCGTCACTGAACCTGTTATCGTGGGTCACGAAAACAACAGCGTTATCGATCTGACGGTGGGAACTGCGATAACCCTCACTTGTAGAGCTGATTATGGCGACCCGCCGTATGTGCTGACTTGGACAAACCAGCTGGAACTAATCGAAGAAACAACTGCCGTAACTGAAACGACAACAATAAGTATGACGAGTACAGACGACGTAAAACTGAGCAATGTCACAGAAACTGTCGAGCCTGTAACGACGGCGTCGACATCAGAGAACACATCAATTGAAGATAGCGCATATGTTACGGCGAACACAACAGAGTCGACATATTTTGCGAATGAAACACTCATACAAAATGCCGACACCGGTGTTCCGATAAACGAGACGACGCGTATAGTTGAAACGATTTGGCCGAATCGAACAAGAGCAAATACAACAGGATGGGACTACAAAGTACACCGGCGTTCGGTGAGATCTTTGAAAGAAACAGGGACGTCTTACGAGAATGAATCAACGGTTTCTGTGGATTCAGTTGAAACAACGACTGAAATGTTGTACAATACCACAGGATGGTCAGATCGTGGTGTGTCAGAACACGAAGACAATACAACGGACACGACTGTAGAGAGCATGACCACTGCTGCCTGGATATCTGATGTTGACTCAACCACCACCGAATGTCCCACTTATAAACCCGAGGAGGAACCTTTTCAGGTCGTAAACAGTCTCCCAGGGAGCAGATACGACACGGAGCCGTCCGGCTACCGACAGACCCAGAACGCAACCAACCGTCTGGTGTTCGTGGCCCGGCTCGACGATGACAACACGACACTCTACTGCGTGGCGACCAAGGACAGTCGTCGTGTCCTCGTCGCTGTCTCACTCAACGTCACAGGAACGACGCCACAGAAGTCAACTGATCCTGCTCTCACAAGCGAAACAACTGTTCCTGTGCACCCGACTGAAGTTGTACAGCCGGCTGGGCCGTCTATAGAGGAAGAAGCGACAAGTGGAGACTACATGTGGGTGGTGATAGTGGCGAGTTGTGTTGGGGCGATTCTGATACTCGGTGCCATCATTGCTACGGTCTACTATCGACGACGGACACGAGGACAACTGCTACTTGACGACAATGCCCACGCGAAGGACACTGACAATGGTCACAACTTTGAGAATCCAGTGTACGAGAATATAGACTGA

Transcript

OALVG00000006049.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05454	DAG1	Dystroglycan (Dystrophin-associated glycoprotein 1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003410	Domain	HYR domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR008465	Domain	Dystroglycan, C-terminal	Interproscan
IPR011489	Domain	EMI domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR051275	Family	Cellular adhesion and signaling domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11640	NEPHRIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0005911	Cellular Component	cell-cell junction	Interproscan
GO:0016010	Cellular Component	dystrophin-associated glycoprotein complex	Interproscan
GO:0050839	Molecular Function	cell adhesion molecule binding	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-