Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
OALVG00000002037.1 | M7GPPPN-MRNA HYDROLASE | tig00000164 | 1196750 | 1211483 | + |
CDS | |||||
OALVG00000002037.1 | |||||
Transcript |
OALVG00000002037.1 |
Protein |
OALVG00000002037.1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00293 | NUDIX | NUDIX domain | Domain | Interproscan |
PF05026 | DCP2 | Dcp2, box A domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR000086 | Domain | NUDIX hydrolase domain | Interproscan |
IPR007722 | Domain | mRNA decapping protein 2, Box A domain | Interproscan |
IPR015797 | Homologous_superfamily | NUDIX hydrolase-like domain superfamily | Interproscan |
IPR020084 | Conserved_site | NUDIX hydrolase, conserved site | Interproscan |
IPR036189 | Homologous_superfamily | mRNA decapping protein 2, Box A domain superfamily | Interproscan |
IPR044099 | Domain | mRNA decapping enzyme 2 , NUDIX hydrolase domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR23114 | M7GPPPN-MRNA HYDROLASE | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
GO:0000290 | Biological Process | deadenylation-dependent decapping of nuclear-transcribed mRNA | Interproscan |
GO:0000932 | Cellular Component | P-body | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0016787 | Molecular Function | hydrolase activity | Interproscan |
GO:0030145 | Molecular Function | manganese ion binding | Interproscan |
GO:0050072 | Molecular Function | obsolete m7G(5')pppN diphosphatase activity | Interproscan |
GO:0140933 | Molecular Function | 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |