Gene detail

Detailed information of MBSQW58_g4011 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g4011	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	ctg125	818467	820463	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g4011

ATGTCATCGAGACATATTTATTATTCTGATAAATATTTTGATGAAGATTTCGAATACAGGTAGATCTATTGCAATAATAAAATTTATTAGGCTGATTTAAATTTCAAATATTTTTTATTACATTTTTTAAACACAGATGGCAGAACAAGTCAGAACACGAAATTCGAAAAATCGATAACTTGATTTTTGTTTTGCAGGAATAACGAGttgacacgggttatctgtccctacttttctgtgacattaacaagtatcaacatttacaataatcaatgtttaacctaaattgtacacaatgaaatgccaaaataaataataaaaTTTAAAAAAAACCCTGCCATATGTATTCTAATCCAACCGTACGTTTacaaatgaaaggaatgaaatggggtttattgtctactcaacaccaattgggtcttttcgagacatacagatatattAAGTGCAATACGAgacaaaaagggttttgacaaacttcacgcgaaccatgtcagcaaatgaaatgttcctgtctttggatacaaataatattttttatgctttctgaaggcagatgagcttaacatTACTAATGTACCATGTGCATAGCAATTTGACATGAGTTggttcgaattcctgtaaatgtgggtttaagtgatatggtctgtgggactgtcaaggaaaagtgtctagtctgtcagctatgcgataaaaattgggggtctgtgtataattGGAATATAATTGACATAAATTTCACATGTCTCCATATGAAGAGAACCAATTAATATAAAACATCTTTTGACCATTTGGCCAGTTTCCATGTTTTACAATACTTTAATTTAGCAAATCTTAAAATATTCTTTTATTAACAATGACTATATGACTCATTTTTTAGTTGTTTGGTTCTTTACAGGCATGTGATGCTACCAAAAGAAATTGCTAAACTTGTGCCAAAAAATCATCTTATGTCTGAACCAGAATGGAGAAGTATTGGTGTTCAACAAAGTCATGGCTGGATTCATTATATGAAGCATGAACCCGGTAAGGTCCATCTTAATTTTTTTGTTCTAAATTACGTTTGCCATAATGTTACCCACTTTGCTACTGAAATGTTTTTCAGTTAGTTTGGAGGCTTTATTATTTATCAACATTTCAAAATACTTTGAGTTTGAGAGTGCATACCCGCAGTATTACTATAATAAATCACAAATTAATACGAGATACAGTACTATGAAGAGAAAGTAACATGTGTAGTTACCcatacacaattattgtgtgttgcattctggctcaacccgtgaacccagacaaccatcagtatttttgagaattagtcagactttcaatatatagtaaatgtatttactttgatattcatgacatacttttaaaatttcatgctgaaaattaACCCCAAACTGATGTTTTTATCTTATTTTTCTAACATAAAATTTGAAATCGAAAGTTATTAAGAAACGATTCCTTTAAAAAATATATTCCCACACTCAGTTGTGCTTATGAAATCGCATAAAAGCAAATAACATGCATCGCCAGAATTCAAGTACATcctgatagccctgccgatcttaccattagccaaggggaattgtgctggggaagtcctcatggttTGGTCATCTATGAACAGATTACTAGTAGCAATATTGTCTCACAGGACTCTTGATATCAACCGCAAATTCAAGTTACTTCAAACATAAAATCACTtgtatgcattcagtctacctcgactttttccagtttattgaatttaacaatatggcagacctgacATGCAATCAATCAATCAattattacttgacaacgattcgggcaaacgaatcgaatcgtatgtttataaaccagatgcagtctatccatatcatacctgttttattaatgttgtttcctgtatctaaatgtcgtacaaagattacgtTTATCTAATTGTTTTCTTTTCTCTATTTTCAGAGCCTCATATACTATTGTTCAGAAGAAAAGTTACTGTCAGCTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01111	CKS	Cyclin-dependent kinase regulatory subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000789	Family	Cyclin-dependent kinase, regulatory subunit	Interproscan
IPR036858	Homologous_superfamily	Cyclin-dependent kinase, regulatory subunit superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000307	Cellular Component	cyclin-dependent protein kinase holoenzyme complex	Interproscan
GO:0007346	Biological Process	regulation of mitotic cell cycle	Interproscan
GO:0016538	Molecular Function	cyclin-dependent protein serine/threonine kinase regulator activity	Interproscan
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0019901	Molecular Function	protein kinase binding	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0061575	Molecular Function	cyclin-dependent protein serine/threonine kinase activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-