Detailed information of MBSQW58_g3936 in Bathyacmaea lactea Gene info
Gene IDAnnotationContigStartEndStrand
MBSQW58_g3936SEC24-RELATED PROTEINctg12313133681349710-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00333Ribosomal_S5Ribosomal protein S5, N-terminal domainDomainInterproscan
PF03719Ribosomal_S5_CRibosomal protein S5, C-terminal domainDomainInterproscan
PF04810zf-Sec23_Sec24Sec23/Sec24 zinc fingerDomainInterproscan
PF04811Sec23_trunkSec23/Sec24 trunk domainDomainInterproscan
PF04815Sec23_helicalSec23/Sec24 helical domainDomainInterproscan
PF08033Sec23_BSSec23/Sec24 beta-sandwich domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005324DomainSmall ribosomal subunit protein uS5, C-terminalInterproscan
IPR005711FamilySmall ribosomal subunit protein uS5, eukaryotic/archaealInterproscan
IPR006895DomainZinc finger, Sec23/Sec24-typeInterproscan
IPR006896DomainSec23/Sec24, trunk domainInterproscan
IPR006900DomainSec23/Sec24, helical domainInterproscan
IPR012990DomainSec23/Sec24 beta-sandwichInterproscan
IPR013810DomainSmall ribosomal subunit protein uS5, N-terminalInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR018192Conserved_siteSmall ribosomal subunit protein uS5, N-terminal, conserved siteInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR029006Homologous_superfamilyADF-H/Gelsolin-like domain superfamilyInterproscan
IPR036174Homologous_superfamilyZinc finger, Sec23/Sec24-type superfamilyInterproscan
IPR036175Homologous_superfamilySec23/Sec24 helical domain superfamilyInterproscan
IPR036180Homologous_superfamilyGelsolin-like domain superfamilyInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR041742DomainSec24-like, trunk domainInterproscan
IPR050550FamilySEC23/SEC24 family, SEC24 subfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13803SEC24-RELATED PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0090110Biological ProcessCOPII-coated vesicle cargo loadingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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