Gene detail

Detailed information of MBSQW58_g17839 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g17839	MALATE AND LACTATE DEHYDROGENASE	ctg3745	2583	5225	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g17839

ATGCTAAAGTTGCTGTGCTGTTTGCCAGTGGAGGTATTGGACAGCCTCTTTCTCTTTTACTGAAAATTCTCCGCCATATCCCAGCTATCGCTATATGATATAGCTCACACACCTGGTGTTGCTGCAGATCTAAGTCATATTGAAACTAGAGCAAAGGTGAAAGGTTACATGGGAGCTGAGCAATTGAAAGAATGTGTTACTGATGCTGATGTTGTGTTAATACCGGCAGGCGTTCCAAGAAAACCAGGTAATACATTTTCCCAACAACATATGTACATGTATTGATGTATTGCAATAATTTATTTATTATTTAAAATTTTGGATAATTATGTGATAATTCTGTTGGAAAAACCATCAAAACAGCAGTGGTGCAATGAAAGTTGAACTTCAACACATATTTTGATACTTTTGACGTCTGTTATCTGAATCTTGAAATAAACATCCTACCTGATGATCTACCTGTACACTGTAGACACCAATATCCAGTGGTGTAGGTAGCGATCTCTCATTTATCAGCTCCGTAACGATAATGTGtgtcactgttgatggcttcttatcaggtttactgattctatctgtgaggaacaaagttataatttagaacatcagtatgtgagtggtgtttacattgttacaaaaaaacacaaacaagatagtcaaaagtgatgtttgtaattctgtggttaaatgcatttgaaacaaaaTAGggtgctagtttagtatgcggcctaccttcatgccactgGTAGCGAAGGGCAGATAACTGAAaaacaccaaagcaggtcaaacatgttgtaatatcatgctatttcattttttttaaaaatattaattaaatcactgcagcccactgaagcagggtcgtgataaaaacaattagcaatataaatttcttgattatggaaaaatctgtaggaatgcataaataattaaattaagaaatataaataaataaacaaataattatttcagaaaatatcagtcggggaaacaaaattataactggtgtcagtggtgtgtatattttcgcatcatttttgggtgtttgcagacttatgtagaatgattagcatgtattccacgttttaggagtgtatggagtaattattacatataggggagtcggagtcgattacaccaaaaaaaggagtcaggagtcggtcttttttctaccgactccgcagtcatgctcatcttccccggtaggtttcttctgccaacctgaaatctcaaatcgccgactagtgggcagtactgcccagctcgtagatcattgAGATATAGTACGGTATTTATTTTGTCCAAGGTGATTTTAATGGTGTACCGTTTGTTACTTTACAGGTATGACTAGAGATGATTTATTTAACACCAATGCTTCCATTGTCCGTGATTTAGCAGATATGTGTGCTCAAACTTGTCCAAATGCCATGCTGGGAATTATCACAAATCCAGTAAGAAGTTAAAACCATTGCTATTATGACTATTATACCTGCATTGTtattatacccccttcactattataccccttcactattatactttccccttcactattatacccttcactattatactctccattgttattatacccccttccactattatatttccattgttattttaccccttaactattatacccccttcactattatacctccattgctatgatacctccattgctatgattcctccattgctataatacattgctatgattcctccattgctataatacctccattgctttttaatacctccattgctatacctccattgctatgatacctccattgctatgattcctacattgctatgattccttcatttctatgattcctccattgctataatacttccattgctataatacattgctatgattcctccattgctattattcTCTGACAACTTGGAATATTCTGTGTTGGAGATATACTAGGCTATTTTATTCAATGTACTTTATTCTCAAATGTTTTTTTTTTAAATTGCTTCAGGTAAATTCAACTGTTCCTATTGCATCTGAGGTTTATAAAAAACATGGAGTATATAATCCGAAAAGAATATTTGGTGTTACAACTCTAGATGTTGTCAGATCGAATACATTTATTGCTGAAGCAAAGGTATGGTTACCTATGTTATCCTTGTACTGACCCCACTAGAAAACAAGCAAGAGTTGATGGTTTCAATAcagcggtaccgaatcgcctacttttaattaattttcaactgcaacagtggcttttaaagtgaactgccagttacgcatgcatggtgactgaaatttattgtatcatccgatggactagacactttttttcttgacagccctgctgaccctactactgtcaggggaataggctggaatattcacctagattgaaaccagcatttacagaattcgaaccagggacatcctggttgccagtTTCCATCTTACAAGCCAGCCTAGTAAAGTACATATACCGCCACGGTTTTTATTTTCTTACACTTTATGAAAAATACTTTGAGATAGTTAGATTTTCTCAAAAAGAACGGAAGACTTTCAGAAATCAACACTCTTTCTTTGAAGATTTTcaaacaaatcttgatagatatgttagatttgacctgcatcaaaatacatcaaataaatcttga

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00056	Ldh_1_N	lactate/malate dehydrogenase, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001236	Domain	Lactate/malate dehydrogenase, N-terminal	Interproscan
IPR001252	Active_site	Malate dehydrogenase, active site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11540	MALATE AND LACTATE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006099	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0006108	Biological Process	malate metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016615	Molecular Function	malate dehydrogenase activity	Interproscan
GO:0030060	Molecular Function	L-malate dehydrogenase (NAD+) activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-