Gene detail

Detailed information of MBSQW58_g16101 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g16101	D-ALANINE--D-ALANINE LIGASE	ctg1254	11186	13855	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g16101

ATGCTTTTTTTTGCACTTCCTAATTTGCAAACAGGAGACTATGTTCAAAATAGTACTTTTATTGCTAATGCTGTTAAAAATGGAGCAAGTGCAATAGTTACGGCTAGTTCTTATGAAAACACAATTAAGGAGTTATTACATCATATTCCGTCTAAAAAGAAAATTTCAAAAATAGGAATTGCCTGTGTGCCAATACAGCATATTAGAAGTATTATGGCTTATTACAGTGCTCTGTTTTTTGATTATCCTGCAAAAAAATTAAAAATAATTGCTGTTACGGGTACAGATGGCAAAAGTACAACTGTAAGTTTTATTCATCAATTGTTGCAAAAACAAAATATTGTTGCTGGATTTTGGTCTACCGTACAATTTTTTAATGGAAAAAAATATGTATCTAATGATTTTCGTCAATCTACTCCCGAATCTCCCGATTTACAAAGAGCCATGAGAGATATGTACAATAATAATTGTACACATGCAGTACTAAGTTACAAGTCATGCCTAAGTAAAAAACATTACGTGTACATGATATAGAATTTGATGTAGCAGTGCTTACAAACATAGATAGCGAACACCTTGAATTTCATGGAACACTAGAACAATATGTACGCTTTCAAGACAAAGTAATTTGTTTTCTAAAATAAAACACAAGTGGAACAAGGGATTATACGATTTGAAGATTCTTATAAAAAACTTTTTGTAAGCAGAGTATCAAAAGACGTAAACATAGAAACATATTCTCTTTTGGACAATAAGGCAACATATTTTATAAAAGATATACAACAACAAGTAAGTAAGTCTGAATAGTATGCTGTATTCTAAACACGATAATCATAACAATGGCATTTCTCTTACACTTAATTATGCTGGCACTTATAATTTAGAAAATGCCCTTGCTGCAGTTATTGCTGCATATGCTGTAAATAATAAGAAAAACATCACACTAGAAAGTCTTGTAAATACCGTAAAATCCTTACAAACTCCCAAAGGACGTATGTACTGTATACAACACAAAGGAATAACACTTATTGTAGATTATGCACATACTCCGGGAAGTTTTAGAACTATTTTTCCAATGTTTAAAAAGTTATTAATACAAAATACTAACAATAATTCTAGTAAAAAACATGAAAGTGGGAGACTTATAGAAGGTTTTTGGTTCTGCTGAGGATAAATGATGTACAAAAACGATACATGCACAGGGCAGTATGCGGATCAGCATGCAGATATTATAATTTTAACGGACGAAGATCATCGTACAGAGAATGCATACGCTATACTTAAAGACAACTGCGTGGTTGTAAAGAGAATAACAAAAATAGAATTCTTAATAAAAATTTATATCTTATTGAGGATAGAAAAAGTGCCATAAAACAAGCCTGTAAGTTAGCTAAACAAAATGATGTTATTATCTGTTTAGGGAAAAGGACATGAGAAGAGTATTGAATATAAAAACTTTGTATTAGACTGGAATGAAATTAAGGTTGCAAAAACTGCATTACAAAATTTATAACTTTATCCAAATGCTTAAAGATACTATACTGGTAGGCATATGAATATAGCATTATTTTTTGGAGGAAAATCTCATGAACATGAGATATCGCTTGTATCAGCAGCATTTATTCTAAAATCTCTTTTATTAGCACAACATACTGTTATACCCATTGTTATTACAAAAGCAGGCAAATGGCATAGCTGTGATGTTAATGAGCAAATTCTATTTTCTAATAAACACAAATCACTGAATGCAAGTGACTTTTTACAAGAAGAATTATGTATTGTCCCACAAAGGGGAATATATACTACCATGGGAAAGCATATTAAAATAGATTGTGCATTTATTATGATACATGGTGCAGGTGGAGAAGACGGAATCTTTTGCAGTCATTGTTACAAAGTGCAAATATTTCATTTACAGGTTGTAACATGGAATCGAGTGTAATTTGTATGAATAAAGATTTAACAACACATGTACTTTCATGTAAGGCTTCTCATATTCCCTTGTTACCTCATAACACTCTCACTGTAGATGAAATAGAAACATATTTGCCTACATTTACGCCTCAGTATCCAATTATTGTAAAACCCACAGATGGTGGTTCATCTGTGGGGAGTACAGAAGTGCATAAACAGTCTGAATTATTGCAAGCCTTGTATAAATGTGCAAGATATACAAATCGCATTCTTGTAGAACCTTTGTTATTACATATACGAGAGGTAGAATGTGCTATTATAGGCAGCGTAAAGTCTCCTGTTGCTTATACGATTGGCGAAATACATGTTGGTACAGATGGGGGAGTTTATACCTATGATAAAAAGTATCATGACACTGCAAATGAAGTCCAGCTTACCCTTCCTGCAACTATTTCAAAAAAATGTGTTTCAAAAATTAAAACATATGCAAAGGATATATACACAGCACTTGGATGTAACGGATTTGCACGAGTAGATTTTTTTCTAAACGAAGGCAAAGAAGATGATGGAAGTATTTATTTTAACGAAATAAACACCATCCACGGATGTACAGACATAAGTCTTTTTTCTCGTGCTGTAATGTATGACGGACTATCTGAAGTGGAAATGGTAAATTCTATTGTAAATTTAGCACTAAATACTAAGAAAGTATTTAGTCAGTATTTTAATATAAATGGCTTAATTTTTTTTTATTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07478	Dala_Dala_lig_C	D-ala D-ala ligase C-terminus	Family	Interproscan
PF08245	Mur_ligase_M	Mur ligase middle domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011095	Domain	D-alanine--D-alanine ligase, C-terminal	Interproscan
IPR011761	Domain	ATP-grasp fold	Interproscan
IPR013221	Domain	Mur ligase, central	Interproscan
IPR013815	Homologous_superfamily	ATP-grasp fold, subdomain 1	Interproscan
IPR036565	Homologous_superfamily	Mur-like, catalytic domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23132	D-ALANINE--D-ALANINE LIGASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0008716	Molecular Function	D-alanine-D-alanine ligase activity	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0009252	Biological Process	peptidoglycan biosynthetic process	Interproscan
GO:0016881	Molecular Function	acid-amino acid ligase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-