Gene detail

Detailed information of MBSQW58_g15114 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g15114	ABC TRANSPORTER ATP-BINDING SUBUNIT	ctg886	77399	79513	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g15114

ATGATTATAGAGAAAACACTATACGCTGATACTAAAACAATAACTCGTAAATGGCACATTATAGACGCAAAAGATGTTGTCCTAGGAAAAGTAGCTACTGCTACTGCAATATTGCTTCGTGGCAAACACAAACCAGAATTTACTCCACATCAAGAAGTTGGAGACTATGTAATTATAATTAATGCTCGTCATGTAAAACTTACAGGCAGAAAAAAAGAACAAAAAATGTACTACAGACATAGTGGTTACCCTGGATCATTAAAAGAAGAAAACTTTGAAACAGCTATTAAAAGAAAACCAACATTTCCACTCGAAAATGCAATACGTTTAATGCTGCCAAAAAACAGAATGGGAAATAAAATTTTTAGTAATGTGAAAATTTATGCAGATGCAAATCATAAACATGAAGCACAAAATCCAGAGGTCTTTGAGGTAAAATAATATGAAACAATTTAGCGGATTAGGAAGAAGAAAAACATCAGTAGCACGTGTTCACTTACGCTCTGGCAAGGGTGAAATACTTATCAACAAAAAAAAACAACTTGATGCTGTGCTTCATAGAAAAAAGCTTATACTGAGTGCACTTCGCCCATTAGAAGTTACACAGCAAAAAGACAAATGGAATGTAATTGTTACTGTACGCGGTGGTGGTTGTACGGGTCAAGCAGAAGCAATTTCTCATGGACTTGCTCGTGCTCTTCTACAAAACAGATGAGTCTCCGCCCTGTACTTCGTGAACACAATCTACTTACGTGATGCACGTATGGTAGAACGTAAAAATACGGACAACGTGGTGCTCGCCGACAGTTCCAATTCTCAAAACGTTAGAACTTATACAGATTTATTTACATTATCTCATACACTCTTGCAGACTTTTGTAAATATGTAAGATATGATGATGTTGTGCAATATAAAATAAGAAAATAAATAGGAGGTTTTAATGCTAACAGTTAGTGATATCACTTTGTCTTTTGGTGATAAAAAAATTATTTGAGGATGTCAATTTACAATTTCACACAGGGAATTGTTATGGCATTATTGGTGCCAATGGTGCTGGGAAATCGACCTTTTTAAAAATATTGTCAGAAGAACAAGAGACAGACAAAGGGACTGTGTCAAAAAATTCTAAAATGCGTATAGCAGTTCTCAAACAAGACCAGCACATGTACGATGAATACTCTGTTTTGGAAACCATTTTAATGGGTCACGAAACTTTGTACAATATTGCCAAAGAACGAGATACAATTTATGCAAAAGAAGATTTTAGTGAAGAAGACGGACTTCGTGCAGCAGAACTAGAAGAGTTATACTCGTCTCTTGGAGGCTGGGAAGCAGAAACAGAAGCTGGAGTTTTAATAGCAGGCCTTGGTTTGCATTCTGATGTTTTAGAAAAAAAAATGCACACATTAGAGCCATCCGAAAAAGTACGGATATTACTTGCACAAACTCTTTTTGGTAATCCTGATATTTTACTAATGGACGAACCAACAAACGGAATTGACTTAGAATCTGTTCAGTGGCTTGAAGAATTTTTATTAAAGTTTCCAAACATTGCCATTATAGTATCTCATAACAGGCATTTTCTAAATACTGTGTGTACTCATACTGTGGATTATCGACTTTGGAAAAATTAACATGTATGTGGGGAATTATGACTTTTGGTTTGAAGCTAGTCAGCTAGTACAAAAACAACGTAAACTTGAAAAGAAAAAAACTGATAAAGAAAAAGATTCATTAAAAGAATTTATTCAGCGTTTTTCATCTCACAAAGCCCGTGCAAGACAGGCTACATCTCGTAAAAAATTACTTGTGAAGTTAGAAATTGATGAATTACCACAAACTTCTCGGAAGTTTCCTTATGTACATTTTGGTATAGAACGCGAGTGTGGAAAATCTGTGTTAGAAGTTAAAAACATAAATGTAAGCATTGAAAACGAACATGTTTTACAAAATTATTCCTTGCAAGTACAGCAGGGACAAAAAATAGCATTTGTGGGATCTTCTAACCTTGCAAAAAGTGCCTTGTTTGATTGTGTTTCTGGAATTAGTACTCCAACAAATGGTAGTTTTGATGATGAGATTGTAACTCATTGCTCCCGTATTATCAAAAGATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00572	Ribosomal_L13	Ribosomal protein L13	Family	Interproscan
PF12848	ABC_tran_Xtn	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR005822	Family	Large ribosomal subunit protein uL13	Interproscan
IPR005823	Family	Large ribosomal subunit protein uL13, bacterial-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR032781	Domain	ABC-transporter extension domain	Interproscan
IPR036899	Homologous_superfamily	Large ribosomal subunit protein uL13 superfamily	Interproscan
IPR051309	Family	ABC transporter ABCF subfamily ATPase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42855	ABC TRANSPORTER ATP-BINDING SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-