Gene detail

Detailed information of MBSQW58_g15016 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g15016	TRANSMEMBRANE PROTEASE SERINE	ctg866	40850	44897	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g15016

atgaagtggagcttattgtctactcaacaccaattgggtcatttcgagacatatataaaggtatttgttttattaggcgtgcaatgcaggagacgtttgccagggcagcggcaccatcgcctactcttatatcgatAtagacacttttcccttgacagtcccgctatcctctccactgtcaagggggaaccgggctggaaatttcaccaaggttgaaaccggcatttactaacattcgaaccctggacctGTTGAAATCTGTGAAATCTGTGAAAACTGCTGATTTCTGGCAACAGAAAGCAAAGATTCAACGATTGCTTCGTGTTGCAGGAGTTGTCAAGGTACCGAAGAATTTAACACGAGATGATGGCGACACGGCTTTATTTGAATGTTTTGTTCCTGGTGCTAAATCTCTTATCTGGCATAAGGATGGTGATATTATCTTCCCTGACAGCAGAAAAACGGTAAGAATTTCCCCTTCTTCCGTTTTGGTGGAGGGGGGGGGGGCATATATGGAGTCTTACTGGAGTTTAATAAATACCACTTCTAATATCTGATATATGTGAGATAACTGATTTAAATGTTATAtgtaatctttgtatgacatttagatacaggaaacaacattaataaaacacaatgtataatatggatagactgcatctggtttataaacatactacgtttcgattcatttacccgaatcgttgtcaagtaataatgattaacaattattaacagaccaatatatactaacaaatatagtgacaggattaactctacaaaaaactctacaaaaaacatccaatgggattggacgactcagagtaaggataaagagtaaattagatgattaataattgacaaatatacatttgagggtggtatcctaaaaattaaattgatattgtataggaaataagaaagtaattaagatttaaatctattcagtccacaatttgggtatataatgtcctttgtctctgtttaacttgggtttatggcggttgatctcaaCCAAAAAAAAACAAGctaaagactaaccttaaattagacaccatcatatccctcatagaattgtgcatagaatcaacatatttctcttggaaaacagaaatttatgaacagattcatggcctccccatgggttctccgattagcccactgattatcgaaatttacatgacccactttgacgaaacagcactggtaacagtaccattccaacctctttgctggctcagaaaagttgatgacaccttcgtaattatcgacccaggtcatgacccacaccaactgctccaacatttttactccatccacccaccaacttctcaccactctacaaaaatcaaagtaggaataatatctacattagtcagaagagccaaaatgttatgcgatgtagaatacctagacgaagaactgactcacccaaaaaccattttcatcgaatacaacgaataccccgcgaacctagttgaaaataccatgaagaatatcctaaatgaacagctagaaccagctattaaagaaaatcccccgtttcatatatccattccttacatcggccccacaagccatcgcataaaacgcctattatctagcaagttaggtgttaatattatttttcaaaacgaaaccaccctcaagacactgctcaaagccactgggcgtcttggagaaccctacagtgctgaccccagaggtgttgtctgtcaggttacttgtggatgtaatcagacatacatcggcgaaacgtcctgtcccatttctgttagaatgaaagaacacaaacgcgccactaaaaacaaagaaatatacaaatctgccatagctgaacatatagtcaataaccctggtcatgaaattagttgggactgcacaaaaatactggccactaatcacaacaattggaagaaccgtgaaataagagaagcccttgagatcaaccgccataaacccaagttaaacagagacaaaggacattatatactcaaattgtggactgaatggttttaaatcttaattactttcttatttcctttaaaaagttattatatcaatttaatttttacttttctgtagaataccaccctcaaatgtatatttgtcaattaccaataatttactctttatcctcactctgagtcgtccaatcctattggatgtttttttgttttttgtttgtttgttgttttgttgagttaatcaactatacgtgttagtacatattggtgtgtGACATAGTTGTGACCACAAGAACAATACTTTAATGTACAACATCTGTAAATATTTATTTCAGATTTTGGTGAATAACTATCTAATGATCCAGAATCTGGTTGAAACTGATGCCGGTGTTTACACTTGTGCTGCCAATGGAGATAATGGCTGCTTCGCCAAGAAATCAGCAACCCTTAGAATAACATCTACTGGACATAATGAGTGTACGtatatttatatatacatatttatatTTTGCTAATGCTATGTTGAGGATATTCGGCGAAGTCTTTGCGATTCTATAGGAATAGTTATATTGTTGTTTTATTTCAGGGGGTAAACGTTAACGGGTCTGTAGGTTAAATCATACAATGGATATTTCAGATTGTGGACGACCTATCGTCAGCGCCTCCACAGATAAGAAATACCGGATAGCTAGTGGTAGAGAGGCAGAAGAAGGATCAGCACCTTGGCATGTCATCATCTGGGAAACTGTTCATGTAAGTTATTCTGTTTCCGGTAGCTTGTAGTCGCAACAGAATAACCGTGTCCTGGTGGAATATCAGGAATCAGAATGGAATCAAATTGAAATGAAATTATTGTGCCATGTGTAGGATCACCTCATTGTTTCTCACGCAGATCAAGCAAATATAACATGTGTGCACACACACGTGTTCTCCTTTCAATTGTTGAGTTTATTTATTATGTTGAGGGTAGTCTGGAGATAAACTGGAGATAAGTACACTAGAACTGTgggttctcagcgcccaggttggaggggaggggcaaagatacttttggcgtccccacgtaatgacaataacatacagaatgaataaattatgcgccccttcacacctgctcccgggggcgactgtcccccTCGCCTTCCCGCTTGCTACGCCTCAATCACTGCACGTGTTTTGATTTTGTTATTCGTTGGATGATATTTATCATTGTTAAAATatgtcgacatttcaaatgtcaaagggttaatattaaatgtgaaCCCATGTGTTCTGGAAAGGGTTAACATGCTCGGCCCTGTCTTGTGCTGTTCAATGAGCATCTGGGTCATTTCAGGGTTAACTAACACAAAATTTATACCATAAATCAACTCTAGTATGTATATTTTTAGGGCATGGCTTATTGTGGCGGTTCTTTAGTCAATGAAAACTGGGTTCTAACAGCTGCACACTGCGTCAGTGAATTTGAGGAATATTTTGAATATAAATTTGATAAAACAATGATTGAAATGTTTATTGGAACTCGTCATTGTCACGGAAGAAAAGGGGTTGTACGGAGAATAAAGGACTATGTGGTTTACCCAAGTTTTAATGGTACGGACTTCAACAATGACTTAGCATTGTTTCAACTAGATAAACCTGTACGATTTAACCAAATGATTATGCCAATCTGTTTGGAAAGGGAAGTTTTTACCAGAGAAATTCTGAAGAGCGGAAAGGCGGGTATAGTCACCGGATGTGGAAATCGATATGAACGCGGCAGACCACCGGCTAATCTGCATGAAGTCACGATACCCTATGTACCTCGGGAATTGTGTCGAGAACGAGCTAAGGCTGTTAACGCTTCCTTCACGGAATTCATGATTTGTGCGGGATATGCTAGAAGTATGAGAGGGGATGCCTGTGCTGGTGATAGTGGGGGTCCGTATTCCATGAAGTTTAATGGTCGATGGATTCTAGTAGGAATAGTATCATGGGGTGTCGGGTGTGACAGAGAGAATCAATATGGATATTATACCCATATCTCGAAATATTACGATTGGATATTATCTATTACGAGTAATAAACAAAAGCTCTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00089	Trypsin	Trypsin	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001254	Domain	Serine proteases, trypsin domain	Interproscan
IPR001314	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR009003	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR018114	Active_site	Serine proteases, trypsin family, histidine active site	Interproscan
IPR033116	Active_site	Serine proteases, trypsin family, serine active site	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR043504	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24253	TRANSMEMBRANE PROTEASE SERINE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-