Gene detail

Detailed information of MBSQW58_g14847 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g14847	DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX	ctg826	51877	55692	-

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g14847

ATGGCGAAAGAAATAGTCTTACCAAAATTTGGAAATACAGTAGAAGAGTGTATTATCAAAAAATGGAACAAACATGTTGGAGATAAAATTGCACTCGATGATATTTTATGTGAAGTCGAAACCGATAAAACAACAATGGAAGTAACATCTACTGAAACAGGAATTTTACGACATATTTTTTATCAAGAAGACGAAGTTGTAAAAGTGCTGCAAAACATTGCTATAATAGGAACTCTTGATGAAGACATTAAAATTTTAATTGCCAATAATTCTGTTGGGGTAGAAAAAAATAATTTTGATTTACATGATGCAAGGTCAAATGAAAACACAGCAATACTTCCGAATAAACAAAAACAAACAAAACATAAGGTTATGTGTTCACCAAGAGCTGGGGCATATTTACAAAACAAGGGAATTACATACAAACAATTTTTAGATATTTTTCCTTTTATTGAGACATGGACTTATGACAAACAACATGTTGAAGAATGTGATGTGATTTCATTTTTTGACAACAGAGCTTCGATAAGCCCCATAGCCATACAAACACTTATTAAACAAAATAAAGTTCTTACAATAACAAAAGGCAGTGGTGTAGATGGCAAAATAGTAGAACACGATATTTTGTTACTAAAACAAAAATCTCAAAAAGAAAATATCAACATAGATAAGCATATAGACAACAAAGTAGATGACAGGCTTTTGGAAAAAGAAATGCAGGTGTTTGCGAGAAAAACGCACACCCACTGTCAAACATGCGTAAAATAATTTCAAAACAGATGATGTCTTCTTTACAATCTACAGCACAGCTTACACTTAATGCAAGCTGATGTAAGACGTGTTCAAGAAATGAGAAAACAATATAAAAAAAAACAACATTTCTATTACAATAAATGACATTATTCTTTATGTTGTTTCAAGGGTATTACAAAACAATCTTTGGGCAAACTCAATTCTTGTTAATAATACAATTATTAGTTATACTGATATAAATATGGGCTGTGCAGTACAAACTTCAAAAGGACTATTGGTTCCTGTAATACAAAAATCTTCAAAAAAAAACTTACAAGAAATTTCTACAGAAATAAAAAGTCTTTCCAAACAGTGTAAAGATGGAAATATTTCTCCTAAACATTTACAAGAAGCTACATTTACTGTGGGTAATCTTGGAGTTTATGGAGTGCAAAATTTTACCCCCATATTAAATACCCCACAAACAGGAATACTGGGAATAGGAGGAATAGACATAAAAACAGTTGTAACAGAAGAGAATAATTATAAATTTTTGCCTCATCTAAATTTGTCATTAACTTTTGATCATAGAGCCTATGATGGGGTGGATGCTGCTTTGTTGATGAAAGACTTTGCAGAAGGTATAGCCTGTGtagaagtagaataatattaaaatacaaataaaaatttaaGGAGTGGTATATGGAAGAATATGATGTAATTATAATTGGTGGAGGACCTGCTGGATACCATGCACGGCGACACTTTTATCAAGGCAGGACAAAAATGTTTTGCTTATAGAAAAAGAATATATGGAGGAACCTGTCTAAACTTTGGTTGTATGCCACCAAAACATTACTAAATGTTGCCAAACAATATAGCTATAATAAAAAACTACAAAGTATGGGTTTATCTGGTAATATAAATTACACACATACACACGCCCTAAACTGGAAAAAAGAAGTAGTACAAATTTTACGAAATAATGTAGAATCTTTATTAAAAAAAAGTAAGGTAACAACAATTATTGGAGAAGCAAAAATTGAAAATTTGTCTGCTAATAAAAAAGTATAGAAGTATTATTGGGAAAAAAAAAATATATGTTTCACAATACCTCATCATAGCAGAAGGGTAGAGAGTTATATCCAGCAATTTCTGGAATAAAAGATGTTAAAATAACAACTAGTAAAGAATTGTTATCACTTGAAAAAATACCAAAAACACTTTCAATTATTGGAGGAGGGGTTATTGGAATAGAATTTGCGTCTTTATTTTCTCAATTGGGTACTGAAGTAAGTATATTTGAATTTTTACCAGAAATACTTCCAACAATAGAAACAAGTAGTGCAAAATTATTAAGGGAAATTTTACAAAAAGAACAAAACATACAATTTTTTTGTAATACAAAAGTAAACAAAGTAGAAAAAAATACTATTACATTTTTAGATTTGGAAAAAAGAGAAAACACAGTTAATTTTTGATGTACCCTATTAGTAAGCACAGGACGTAAAAAAAACCTAGATAAATTTTCTGTTATGGGACTCCATGTATCTAATACAGGTATTATCGTAGATAGTACAATGAAGACAAATATTCCCGATGTATATGCTATTGGTGATATTGTTGGAAAGTTTCAGTTAGCACATGTTGCAACTCGTATGGCAGAAGTTACAGTAAATTCTATTATGGGTCTGTCGTCTTGTATGCGTTATACGGCAATACCATCTGTGGTGTATAGTAATCCAGAACTTGCAAGCTGTGGACTTAGTGAACAAGATGCCTTAGATAAAGGATATGAAATAATAAGTGCATCTTTGCCAATTATAATGAGTGGTCGTGCTCTTGTAGAACACGGAACTGGCATACAAGGTGTGTGTAAAATAATTGCAAACAAAAAAAATTCAAAAATTTTGGGAATACATCTTGTGGGACCTATGGTAAGTGAAGTTATTTCTGTGGCGTCAATAATATTAGAAACAGAATTACGAGTAAAAGAATTAACAGAAATTATATTTCCACATCCAAGCATAGGTGAAATTTTACACAATGTAAGTTTGATGTTGTTAAAAAAAATAGAAAATAATTAGGAGATTATATGGCAAAAAGCATACCAATTTGTATAGATAAAATACGGCAAAAAGGAAAATTACAAACAAAAGACATTCCACTTAATGTGTACATAACAAAGATTTTTCTACAGAAATAAAACGATATGGAAAACCAAAAATTATTCGATTATTTTATGACATGACAATCATTCGAGAATTTGAAACTATGTTAGACAGCATAAAAAAAACAGGTAAATATCAAAAAATCATATCATATAACCACTTAGGTCCTGCACATCTTTCTATTGGACAAGAATCTGCTACTTTTGACAGGTAGAACCAAAGTTTGGCATTAGAAAAGAAGATTTGCTTTTGGATCTCATCAGTCATGGAGAAATTGTTGCAAAATGTCTTTTATTGTGAAAGTGACACAGAAGACGAAAACTTACAAAATATTATGGAAAAATATCAAGATGGTAAGATTTATAAAATTATAGAACAACATCACAAAACAGAATCTATATCTGAATTTGTAGTAAATTATGTATTATACGGATTATTATCAGAAATTTTTGCAAGAGACAATGGTTTTAACAAGGGTTTAGGAGGATCTATGCATGCTTTTTGCCATTTGGAAGTATGCCTAACAATGCAATTGTTGGTGGAAGTGCAGAACTGGGAGCAATTTTGCAAGCCTGTACAAAAAATAAACCATAAACGGAGTATTATATAGCAAATATAGGAATCATGCATATGGCATGTGGACCTGTATGGGAAAGCCTTACTTTTTCTGCCATGGACCAATACCAAACTTTATGGAAAGACAATAAGGGCCCCTCCTTACATGCTTAATGTATTTAATAATTTTTATGGAATGGGTGGGCAAACCGTAGGTGAAACTATGGGATTAGAATATATTGCCCGTATTGGAGCAGGGGTAAATAAACACAATCTTCATGCAGAACGCATTGACGGGTTTAATCCCTTAGCGGTAGCTGATGCTGTACGAAGGAAAAAAGAAATCTTAAAAAAGTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00198	2-oxoacid_dh	2-oxoacid dehydrogenases acyltransferase (catalytic domain)	Domain	Interproscan
PF00364	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan
PF02852	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000089	Domain	Biotin/lipoyl attachment	Interproscan
IPR001078	Domain	2-oxoacid dehydrogenase acyltransferase, catalytic domain	Interproscan
IPR003016	Binding_site	2-oxo acid dehydrogenase, lipoyl-binding site	Interproscan
IPR004099	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan
IPR011053	Homologous_superfamily	Single hybrid motif	Interproscan
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR023213	Homologous_superfamily	Chloramphenicol acetyltransferase-like domain superfamily	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050743	Family	2-oxoacid dehydrogenase family, E2 component	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43178	DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016407	Molecular Function	acetyltransferase activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0031405	Molecular Function	lipoic acid binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-