Gene detail

Detailed information of MBSQW58_g14837 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g14837	ADENYLOSUCCINATE LYASE	ctg826	30600	32732	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g14837

ATGAGACTTCGTGATGTAAGTAAAAAAGTTATTATTCCAGAGCTTATAAAGCTACAAAAAATTCTTATAGATCTTGCCAAAAAATATATTGATGTTCCACAGGTAGGACGCACACATGGTCAATATGCGGTGCCTATTACATTAGGACATACCTTTGCTGAGTATATTAGCAGACTAGGAGGATGTATAGAAGAATTGGAACTACGAACAAATAAATTGACAGGAAAACTATCTGGTGCTGTAGGTGCATACAATGCCCTTTCACTTATTACAAGTAATCCCATGGAAGCGGAAAAAAAACATCTTACTAATTTAGGATTACAAGTATCAGAATACTCATCACAAATTTGTACGCCAGAACCAGCACTGAGACTACTACTAGAATACAATACAGCATTTGGTGTTATAGCAAACCTAGCGGATGATTTACGAAATTTACAACGATCAGAAATTGGAGAATTATACGAGCATTTTTCATCAACACAGGTGGGATCTTCTACCATGCCTCAAAAGAGAAACCCATGGAATAGTGAGCATATTAAAAGTTTGTATAAGGCTTTTTCACCTAGAATTATGACAATGTTGCTTATCAAATATCAGAACACTAAAGGGACTTAACAAATTCTGCATCACTTAGATTTGTAGGAGAATATTTAGCGGGATTTTCTGCCGCAACGGCAAGAACTACATCGGTGCTGTCTCATCTAAAAAGTTGATATTGGTAATATAAAAAGAATTTCATTGTAGATGCAGGAGAAAGTTTATTTGCAGAAGCAATTTATGTTTTACTAGCTATAGAGGGCGAAAATGATGGGCATGAAATTGTACGAACAGCAGTTATTGAATCTCGCAAAAAGAACATCAGTATTTCAAAAATTTTGCAGACTAATAAACAGTTGTGGCAGAAATTGGAAAATGGATTACAAAAAAATTTTAATGGAACACTTACTTGTTCTACATTTTTGAGTAATCCTAAATATTATATTGGGCAAGCAAAAAAACGGAGTAAACAAATAATTACAAGGCATGAAAAAAAACTATCAATACTCCAAAAACACTTAACAGTAAAATTAGCTAGAAAACTGTTGCAAAACCACCCATAAAGAAGAAAATAAAGCCATGAAATTCTCTAGTACTTTGCAACGAATAACATTTGTTATGTTGTTCATTTTTATGCACATTTTGTCCTTGTTTGCCCTAGGTAGGCAAGAAGAAGAGTATCCTATATTGCTAGACCATGTGCAAGATTATGCTACTCTTCGTCTCCAAGAAGAATTGGTAATAACATCAAAAAAATTTAACATGGAACTCTATATAAATGAGAGTAGCTTAGAAACTGCAAATGGATTTTTATCAAATAAGGCATCAGTTATTGTGTATCAGAGTGAAAACCTAAAAAATATATCTCAAATAGAACTTATTGCACAAAAAAAACAAAGATTTGCAGAAAAAAGTTTGTATACTAGTCTTATTTTACTTACAAACCCCCTGCCTCATAATACTACATTAAGTATGCCTTGGGCATTTGTAGGATTTAATATTCAAACCCTAGGTACTCAAATATGGGAAAAAATTTCTACCACTGCACCCACGGCTAAATTTCCCGTATATGTGTATTCTCCTAAGTTAGAAAAATTGTGTAAAAACTCAATAGATATGCCAGAATTTTCTAATTTTTCAAATAAAAAGACCATAACTAAAAATAAAGAGTATAACAAAAGTTTATCACATGCAATTTTTAAAAAATTACAATCTTTTACAAGTTACATACAAGAAGTGGAAATAGAATGTTATGATAGAATTTCTTCTTATAAAGCCACAAATGAATTATTAAAAAATTCTTTTTCTACATCTGCAATTATAACTTTAAATGATGAAGTTGCTATAGGCATTATAAAAGCGTATCAGAAAAATAATTTATCTCCTCCTCCAATTATTGGATACGGAGGTAGTCCTGAAATTGAACGATATATAAAAGAAAAACTAGTGCTGGCAAGCATTGTACCAGATTATACATTATTTGCACACAAAGTATTACAAATTGCAGAAAATTTCTATTTTACATATGCAGGAGTACAATATCCTGCTGAGAACATAATTTCGACCAACAGAGATATCGTATATTCCATTTAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00206	Lyase_1	Lyase	Domain	Interproscan
PF13407	Peripla_BP_4	Periplasmic binding protein domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000362	Family	Fumarate lyase family	Interproscan
IPR008948	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR020557	Conserved_site	Fumarate lyase, conserved site	Interproscan
IPR022761	Domain	Fumarate lyase, N-terminal	Interproscan
IPR025997	Domain	Periplasmic binding protein	Interproscan
IPR028082	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43172	ADENYLOSUCCINATE LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004018	Molecular Function	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0044208	Biological Process	'de novo' AMP biosynthetic process	Interproscan
GO:0070626	Molecular Function	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-