Gene detail

Detailed information of MBSQW58_g14663 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g14663	DNA-DIRECTED RNA POLYMERASE	ctg785	77785	83688	-

Gene Structure

More details in Jbrowse Sequence

CDS

MBSQW58_g14663

Transcript

MBSQW58_g14663

ATGGTTAATCCTGTAACTGTTGGGTGTATGTATATATTAAAACTTCATCATCTTGTTGATGAAAAAATGCATGCAAGATGTACAGGTTCATACTCTCTTGTTACACAGCAACCTCTTGGAGGCAAGGCTCAATTTGGTGGACAGCGTCTTGGAGAAATGGAAGTGTGGGCATTAGAGGCATATGGTACGCTCGCCCGTCCATGCCGAGTTTATGACGGTAAAATCTGACGATTTGTACGGACGACTGAAAATTTATGAGTCAATTGTAAAAGGACGTGAATTATACAAATCAAGGGTGTGCCAGAAGATCTTTACTAGAGTTCTTATGCGAAATACGAGGGTCTTGGACTAGATATTTCTGTATATGATCCAAAGGGAAAACAGTTGGCATTAACAGAAAGAGATCAAGATCTTATTCAAAAACGAGAACAAGATTTCTAAGTAATTGAAAAAAGTATATACGAAGTAAATAGTTAAAAGGCTGGTGTTACTATGACATTAGTTTTTTAGAAAATAAATTACATGAGGTAAACACGTGGCACAAAAAATCCGACAAAACTTGATTATATCAGAAAGCGTAATCTTAAGCTTACATCTCCTAAAAACTTGAATTACTGTTCATTGGGGACATGGTGAAGTAAAAACAAGAAGACTGATAACTGTCTCCTCTCGTCAGACTCGGACCAGAAAGATGGGCTTTTTTGTGAAAAAATATTTGAAATTTACAATAAAGGAGACTGGGAATGTCAGGTGTGAGAAAATTTCGCTCTGTGAGATATCAAGATAATAACAACTTGATGTATGTGGAGTAGAAGTTACTCACTCACGTGTTCGGCGTGAAAGAATGGGAATTATAGAATTTGTTGCCCCAGTTGCACATGTATGGTTTACATAAAATACCATGTACCATCTCGACTAGGAGATCTTATTGGAATTTCTGGTTCAAATTTAAAATCTGTTTTAACATATGACAAATTTATTATAACAGATCCAGGTGATACAGACTTAAAAAGAGTTTGATATTTATAAGTAAAAGAGACACAAAGAAGAATTAACGGATAATACAACTTTTACCTTTGGTGCAGGAAAAGGTGCTGAGACTATTAAACAAATTTTATTAGGCCTAAATATTGACGACCTTATTATTAAGTTAAGAAAAGAATTAAAGAGAACAAAGTTGGATACTGCGTTGTTGCGTAGAACCAAGTTAACAGGCATTTAGGAGGAACTCTGCGAATGATACAATCATGGATGATTTTAGATGTAATTCCTGTAATACCTCCAGATTTAAGACCAATGGTTCAACTTGATGGTGGACGTTTTGCATCGTCCGACCTTAATGATCTTTATCGCCGTGTTATTAGGATCGACGACAGAATTGCGTGAATGATTTCTAATTCACGTGCTCCAGAAATTATGATTGAAAGTGAAAGAGATTGTTACAACAAGCTGTTGATTCACTTTTTGACAATACTAAAGATACTCGTATAGGAGCAGGAAGACAGGTTAAATGTCTTTCTGACATGTTGCGTGGAAAACAAGGTCGGTTTAGACAAAACTTACTTGGGAAGCGTGTAGATTATTCTGGACGTTCAGTTATTGTTGTAGGACCAGATTTAAAACTTCATCAATGTGGTATACCCGTTAAAATGGCATTAGAATTATTTAAACCTTTTATTGAAAGAAGACTCATAGAAAAGGAGATTTCTTTTAATGTGGAAACACGATGCAAAAGAATAATGATGGAGACTTGGAAGCTGATGAAGTTTTTGAAATACTTGATGAAGTTGTAGATGAACATCCTGTTTTGCTTAATCGTGCACCAACACTTCACAGGTTGGGATTTCAAGCTTTTGAGCCAGTACTTGTAGAGGGAAAGGCAATTCGTCTTCACTGCCCAATGACGTACTGCTTATAATGCAGACTTTGACAGTGATCGAGATGTGATTCATAATACCTCTTTCACCAGAAACACAAATTACAGAATGTTAGCAGGGACCTATGTTGTCATCTCGTGACATACCCAAATCCAACAAACGGAGGACAAATTATATTTCCATCTCGAGAGATATGGTACTCGAGAGTGTACCTTACAAGAAGTGTTAAACCAGGCTCAAAAAATGATGGAAAACGTTTTAGTAGTGAAACAGAGGTGTTTTATGCTCTTGAAAAACATTACATAGAATATCAAACTCCAATTGTTGTTCCCATTGATGGACAAAGGATAGAAACTACTGCTGGTAGAATTATTTTTTCTCGTTCTCTACCAAAACAAGTTGGATTTCAAAATAAAACATTTGATGATTAAAAGAACTTCGTGTTTTTGATAGAAGACGTACTTATAATGAATGGTGCAGATGTTTTGGTAGAGATGTTAGATCGACTTCGAGAACTTCAAGTTTAAATGTATGCAACACTTTTTGGAACAACAATGGGTGTAAGTGATGTTGTTATCCCTCAAAACAAAGAAAAGCTCATTAGAAACCGCACCACAAGAAGTTGCTCTTATCCAACAACGATATCAAAGTGGGCTTATGACAAATGAAGAGCGTTATAACCGTGTGGTAGAATTATGGAGTCGAACAAATGACAGTCTAACCAGAAGAACTTATGAAAGAGTTAAAAAAGACAACGATGGATTTGATACAATAATCTTATAGGCTCATTCTACAGGGCTCGAAGGTAGCAAAAGCAAATTCGTCAACTTGCTGGAATACGTGAGGTCTTATGGCTTAAACTTCTTCTGGAGATATTATAGAACTGCATAATACAATCAATTTCAAAAGAGGAAGCAATAATGTTAAATTTTATATATCTACAAATGGAGCACGTAAAGGACTTGCAGATACTGCACTTAAAACTGCTGATGCAGGATACCTTACTCGCTTAAACTTTGTGGACAATTGCTCAAAATGTTGTTATAACACGTGAAGATTGTGGAACCATTAATGGAATTGAAGTCCAATCATTAAAAGATGGTGAAGATGTAGTAGAAAGACTTTCTGACAGAATTAAAGGCTGTTATACCCTAGAAGAAATTGTACATCCCATTACACGTGATATTATTTTGAATATAAATGAAGAAATCACAAAAGAAAAAGCACGCTATATTGAAGGAATTGGAATAGAAAAAGTAATCATTAGATCTGTATTAGCATGTGAGGCAAAAACTGGAATATGTCGAAAATGTTATGGATATAATCTTTCTACAAATAGACCTGTAAACATAGGCGAAGCAGTTGGAGTAATTGCAGCACAATCTATTGGACAGCCTGGAACCCAGCTTACCATGCGTACCTTCCACATTGGTGGTGTTGCAACAAGAGAAACAGAAGATAGCTTTATTGCTCTTAAATACCCTGTGCTTATTGGAGATATTATTGGAAGTAAGGTAACTGTTAAATCTGGTGAGACAGTTATGACTCGCAAGGGATTCTTAAAAACATCTCGCATTTTTGTAGAATATGAAAAATCAAAATTAAAAAATCTTTTAATAAAAGATGGACAAAGAGTTGCAAAAGAAGAAAAAATTGCAGAGCTTGCAGATAAGTCAGATTTAAAAGCTCAAAACCCATGTATTGTAAGAATGATTGGTTCTAAAATTTTACTAGTGAATGTAGAAAAAGAAATAGAACTAAGAAGTGGTGCAGAACTTAATGTAAAATCTTTAGATATTGTAAAGGCTAATGAAACTATTGCTGTATTTGATTTGTTTACAGAACCAATTATTTGTGAATTTGACGGTAAAATACAATATTCTGATATTCTTCCTGGTAGCACAATGAAAGAGGAAGTAAACGAAGATACAGGAAAGGTTGAAAAGAAAATTGTAGAAGAAAGTTCTGGTGCGTTAAACCCCAGTCTTAAGGTAATAGATAAAAAAGGTGAAGTTATTTTTTCTTATGCACTTCCTTTTGATTCTTACCTAAATGTAGACACCAATCAAAAAGTAGAAGTTGGGCAGGTTTTAGCAAAAATACCTCAAGGCAGTGTTAAAACAAAAGATATTACAGGTGGTCTACCTCGTATTAGCAAACTGTTTGAAGCTTATAATCCACAAGATGTAGCAGCTGTACTTTCTAAGGTTGATGGAACTGTCAAAGAAATTTTATATCAAGAAAAGAAACGACAAGTTCTTGTTGAAGACTATTTTGATAAGGAACACAAACACCTAATTCCTCTAGGACGCCATTTACTTATAAGAGAGGGTGATACAGTAAGAGCAGGAGAGCTTTTATGTGATGGTGAATATAATCCCCATGATATTTTAGAGATACTAGGAGAGTCAGCATTACACTTTTTCTTAATTAACGAAATACAAGAAGTATATCGTTTGCAAGGAGTAACCATTAACGATAAACACATTGGTATTATTATTAGACAAATGATGCGTAATTTAGAAATTGTTAATTCGGGAGATACTTCGTTTATTCAAGGACGTTTGGTAGATAGATATAAGTTTAAAGAAGAAAATGAACGGATGATTCGCCAAGGTGGAGAACCTGCTGTTGCCAAACCCTGTCTTTTAGGTGTAAAAAAAGCAAGTGTAAACGTAGAATCATTTTTGTCTGCTGCTTCATTTCAAGAAACTACAAAAGTTTTGACTAACAAAGCAATAGAAGGTGCTGTAGATTCACTTTCTGGCTTAAAAGAGAATCTCATATTAGGGCAACTTATTCCTGCTGGTACAGGAATTGTTAATCACGAAAAATTTGATTTGTATGATATAGAATCTCAAAATCTTGATGAAAAAGTAGACAAGATACTAGAAAGAACGAGAAGTAGAAAAAGAAGAAATTAGACAAAAGGCTCGACAAGAAGAACAGAAAGAAACATACTAGCTATAAATGTACATATATTTATGATTGTCTTTAAAGTTTGGAGGAACATCACTTTCTGATTATAAAAGAATGTCCGATGTTGCTAAAATTATTTTTTGTGTGCTTTCACAAAGCAAAGATGGAAGAGTTGCTGTGGTTTTGTCTGCAATGAAAAGGAATTACGAAATCAACTTTTAATAGCAGCAGAACTTGCACAACATTTTCATTCTAATGCTAAACACAAGGGTAAACATAAGAAAGTTTTCACTTACAAAGAAGAATGTGAAAAAATAAAAAACGACATTACGATACTTGGAATAAATTATGCAAAGGTCTGCCTGTTCCAACAGAGATAGATTCTGCTTTACACGATTTAGAAGAATTATTACATGGAATATCTTTTGTAAAAGAATGTACCTTACGTACTAAAGATTTTATTTTAAGTTTTGGAGAGAGACTAAGCTGTATCATTATGACAAGATATTTACAGCACTATGTCTGTAAAACACAAGTACATGCAAGTGGCATCACAAATAAAGATATTTTTTATGTTGATGCACGTAAGTATATTATAACCGATGACTCTTTTGGCAATGCCAGTGTGCTTTTTTCTCAAAGTTATAAGAACATAAAAAAATCAGTTAATAAAAAAATCAATATCATTACTGGCTTTATAGCTTCAAATACAGAGGGTATTACTACAACTTTTGGACGTAATGGAAGTGATTATACTGCTGCACTTGTTGCTGCGGCAGTTCAGGCAGAACAAATGGAAATTTGGACCGATGTAGATGGGGTGCTTAGTGCTGATCCTCGCATAGTAAAAGATGCCTTTGTTATTCCTAAAATTAGTTATTCTGAAGCCATGGAATTATCTTATTTTGGAGCAAATGTAATACATCCCCATACTGTTGTTCCTGCATTAGAAAAAAATATTCCCATCATAATAAAAAATACGCTAAATCCTCGTGCAAAGGGAACATTAATTCAAAACAATAAAAATGAATATGGCAAAGAAAATACAAAAAAACAACATAAAGTTACGGGACTTGCATCAACAAAAAAATGCAAGACTTTGTACTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00562	RNA_pol_Rpb2_6	RNA polymerase Rpb2, domain 6	Domain	Interproscan
PF00623	RNA_pol_Rpb1_2	RNA polymerase Rpb1, domain 2	Domain	Interproscan
PF00696	AA_kinase	Amino acid kinase family	Family	Interproscan
PF04998	RNA_pol_Rpb1_5	RNA polymerase Rpb1, domain 5	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000722	Domain	RNA polymerase, alpha subunit	Interproscan
IPR001048	Domain	Aspartate/glutamate/uridylate kinase	Interproscan
IPR001341	Family	Aspartate kinase	Interproscan
IPR006592	Domain	RNA polymerase, N-terminal	Interproscan
IPR007081	Domain	RNA polymerase Rpb1, domain 5	Interproscan
IPR007120	Domain	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain	Interproscan
IPR036393	Homologous_superfamily	Acetylglutamate kinase-like superfamily	Interproscan
IPR037033	Homologous_superfamily	DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily	Interproscan
IPR045867	Family	DNA-directed RNA polymerase, subunit beta-prime	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19376	DNA-DIRECTED RNA POLYMERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0003899	Molecular Function	DNA-directed 5'-3' RNA polymerase activity	Interproscan
GO:0004072	Molecular Function	aspartate kinase activity	Interproscan
GO:0006351	Biological Process	DNA-templated transcription	Interproscan
GO:0008652	Biological Process	amino acid biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-