Gene detail

Detailed information of MBSQW58_g14137 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g14137	THIAMINE PYROPHOSPHATE ENZYMES	ctg700	162914	165432	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g14137

ATGGCACAGCGTACAGAAAATGAGTATGTAGGAATGCCTTGTGGACTTATGGACCAAATGATTATTAGCATGGGTAGTAAAAATTCTGCCTTACTTATTGACTTCCAAGATGTACATAATCCAATACACGAGACAATACAATTATTTGATCCTAACAAATATATCTTTGCTGTGATTTTTTCTGGTATTAAACATAAATTGGCAGATGGAGACCAAGGCTACCTTACCCGCCGCACACAATGTGAACAAGCAGCAAAAAATTTAGGATTTAAACATTTAAGCCAAATAAGTTATTCAAATATTTCTAAACTTACGGCATTAAAAGAAGATGTTTTGTACAAAAGAGCCTTTCATATAATAAGTGAAAATAAAAGGGTAAGAGAGGCATCGCGTGCACTAAAAGAAAATGATGTTAAAATTTTGACCTTTGTATGACAGAAAGCCATTTTTCTCAAAAAAAGATAATTTGATGTTTTATAGAAGAAATAGATACAATAGTAGATATTGCCCTAGAAAACAATGCCATTGGTGCACGGCTTACTGGTGGTGGATTTGGAGGTTCCTGTAGTATACTTATGCCACAAAAATAGAGCAAAACTATTTTTAAGGAAGTAAAAAATATTTCCAAACGCACAACAATTAGTATAAACTGTtaaaataattagaataatgaaaaaaataatagataattttttgccaacaatcacaataacaataatTACACTTGCTACCTTTATGTTTTTTAGAACTTTTTTTCTAATAATCCATCTAATTTCACAATAGAAATTTTAGCCGCAGTATTAGGGACTATTTTAACCATTAGCATTACAATGATTGTACTCAAAAAGCAAGGCAAAATACAAGATGACAACGAGTAAGCATCTCTTTACTTAAAACAGAAGTATTTAAACAAAAAACTAATACTCTATGAAAAATTTATAGACTTATATTCTAAAGCAAATTTAGATGGGAAAATAAATAAAGATGAAATTGGAAATTTAGAGTGTTTTGCAACAAAAATATTTTTATTTACAAAGAATATAAACAAAGGAGAAAATAATTTGGGAGAGCTATTATGTCAATTTGTATACCAATTAGAAGTATTCAAAACTCCTTGTAATTCTAAAGGAGATTTCCAACAATTGCAAAATAGTGAAACAGCACTCAAAATTACCAAAGATTTCGAAATTAGCAAAGATAATATGGTAATATTTTCTGATGTACTTAAAGCAATGAAGTTAGATTTAGGTATTTTATCGACAGAAAGAAAATTAAAAAGACAAGATATTGTAAATGTAAAATACGAGTGCTTAGAACGAATGATAAATTATAGGGAGTATAGAAAGCAATAAAGTTTGTTAAAATAATAACTTATAATTAAAAATATTCTTAAAAAAATATTTGCTTTTTATTACAAAATAAGATATACTATTATTAGTAATTTAAAATTTAATGTATGTAATGACATGTTATTTACAGCAAGGAGTTTGAGTGAAAGCATCAGATATTTTAGTTAAGGCTCTCGAAAATGAAGGTACAGAGTATATTTTTGGAATTCCTGGTGAAGAAAACTTAGATTTTTAGAATCAATTAGAAAATCATCTATAAAATTAATTTTAACAAGACATGAACAAGGTGCTGGATTTATGGCTGCAACCTACGGAAGACTTACAGGAAAAACAGGAGTCTGTCTTTCTACCCTGGGTCCAGGAGCTACTAATCTTATTACTTCAACTGCCTATGCCTATTTAGGTGGTATGCCAATGCTTGTTATTACAGGGCAAAAGCCCATTAGAGAAAGTAAACAAGGTCAATTCCAAATTGTAAACATTGTAAATATGATGAGATCAATTACAAAATCTACACAACAAATTGTAGACGGTTCACGAGTTGCTGCCTTGGTAAGAGAATCTTTTCGACTAGCAGAATCAGAGCGCCCAGGTCCTGTACATTTAGAACTTCCAGAAGACATTGCAACACAAGATGTACCAGAAGAAAATGCCTTTGTGTTTCCTGTAAATAAGGCTAATTTACCCTGTGCAAGTAGTTCCAAAATAGATAAAATAGCAAAACTCATTTTAGAAGCAAAACACCCTTTATTACTTATTGGTGATGGGGGCAACAGACATAAGGCACCACAGGCACTTCGTTATTTTGTATACAAGACTGGTATTCCATTTTTAGTAACACAAATGGGAAATGGTGTTATAGACGAACGCCATAAGGGATATTTAGGAACAACTGCACTTTCAGATCATGATTTTTTACATGCTGTACTAAGAAAGGCAGATTTAATTGTAAATGTTGGATTTAACACAGTAGAAAAACCGCCATTTATAATGCAATACGGAAAACATTTTGGACGAAAGATTATACATATTAATTATTCTGATGCAAATATTGATACAATATATTTTCCACAAGTAAGTCTTATTGGAGATATAAATCACTCCATGAGAGAGCTTGCAAAACGAATTGAAAGCCAAGCCAATGAATGGGACTTTGCAAAAATATTATGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00205	TPP_enzyme_M	Thiamine pyrophosphate enzyme, central domain	Domain	Interproscan
PF02776	TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012000	Domain	Thiamine pyrophosphate enzyme, central domain	Interproscan
IPR012001	Domain	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	Interproscan
IPR014721	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR020568	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR029035	Homologous_superfamily	DHS-like NAD/FAD-binding domain superfamily	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR036554	Homologous_superfamily	GHMP kinase, C-terminal domain superfamily	Interproscan
IPR045229	Family	Thiamine pyrophosphate enzyme	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18968	THIAMINE PYROPHOSPHATE ENZYMES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0003984	Molecular Function	acetolactate synthase activity	Interproscan
GO:0005948	Cellular Component	acetolactate synthase complex	Interproscan
GO:0009097	Biological Process	isoleucine biosynthetic process	Interproscan
GO:0009099	Biological Process	L-valine biosynthetic process	Interproscan
GO:0030976	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-