Detailed information of MBSQW58_g14121 in Bathyacmaea lactea Gene info
Gene IDAnnotationContigStartEndStrand
MBSQW58_g14121TRNA-PSEUDOURIDINE SYNTHASEctg700137270139623+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF01921tRNA-synt_1ftRNA synthetases class I (K)FamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR002904FamilyLysine-tRNA ligaseInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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