Gene detail

Detailed information of MBSQW58_g14095 in Bathyacmaea lactea Gene info

Gene ID	Annotation	Contig	Start	End	Strand
MBSQW58_g14095	MEMBRANE COMPONENT OF AMINO ACID ABC TRANSPORTER	ctg700	84167	86502	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

MBSQW58_g14095

ATGATTATGCCCAAGCTTGGACAATTTGATTTTGTAAGTGGAATTACAATAGCACCAGAAATTATTGCACTAGTGGTGGCACTAGGAAGTTATTCTGCTGTTTACATAGGAGAATCTATTAGAAGTTCTGTAGAAGCAGTTCCAAAAGGACAAAGTGAAGCAGCCAAGAGTTTGGGGCTTGCACCACACCTAAGAATGCAGCTTGTAATTTTACCACAAGCAATGAGAACAGTAATACCACCAATTACAAGTCAGTATCTTAATATATTAAAAAACTCTTCTTTGGGAATTGTTGTAGGGTATCCAGATTTGGTAAATGTATTTTCTGGTTCTACCCTTAATCAGGTAGGCAGAGCCTTAGAAATTATGACAATGACTATGTTTACCTATTTATTTATAAGCGTAGTAGTATCGAGTTTGTTAAATTATTACAATAAACAATTGTTAGAAAGAGGGCTGAAGTAGATGAAATTTTTAGAGAAAAAATTACAAAAAATCTCACGTATTGATACATATACACAGCTGTGGAAATGGAGCAAAAAGAACTTATTTAGTTCTCCCGTTAATGTAATTCTTTCACTTATATTATTATACATTTTAGGACTTGTATTTTTTCGACTTACACAATGGGCATTTATTGATGCAACATGGATTGGAGATACAAAAGAAAGTTGTAATAATTCTGATGGGGCGTGTTGGCCATTTGTAAAAACAAAGTTTAAATTTTTTCTGTTTGGATTTTATCCTCTTGCATGGATGTGGCGACCAGCAGTATATCTTGTTATTATAATTGCAGCAACATTGTATGTGTTTTCGCCGCGTAGTAAAAAACATCGTACCGTGGCATTTTTTATATTTCTTGTAGGAACTCCTATACTTACATTTTTACTAGTAAGGGGATGGGGTTCGTTTGCAGTAGATGCAAGTAACTGGGGAGGACTTTTACTTACCATTGTTTTATCTATATTAGGAATTTTATATTCATTTCCCATAGGAATATTATTAGCACTTATGAGAACAGGTAGTTTTAGACCCATGAGAATACTTGCTACTTTTATTATAGAATTTTTTAGAGGAATACCTCTTGTTACCATTTTGTTTATGTCATCAGTTGTAGTACCATTGTTTTTTCCAACAGAGGTAATACTATCAAAATTACTTCGTCTTGTTGTGGGCATGACACTCTTTCAATCGGCGTATCTTGCAGAAGTTGTACGAGGTGGATTACAAGACATTCCTAAAGGACAAATAGAAGCGTCTAAGTCATTAGGGTTACCATGGTGGGCATATACCTATTTTGTAGTCTTGCCACAAGCACTTCGTGTGAGTCTTGCAAATACAATAAGCATTACCATAGCCTTTATTAAAGATACAAGTTTAGTGCTTGTTGTAGGATGGTTTGACTTACTTGGTATAGTAAAACCACTAAGCAGTGATGTTAATTGGCTGGGAATGGAACCAGAAGGATATTTATTTGTTGGCACACTCTATTGGATTTTATGTATGTTTACTTCACGAATAGGTCTTAATTTAGAAAAATCAGAAAGCTCATTTATTTCAAACAAGGCAGGTATGTAATGGAGAACACAATGAAAAATAAAATCGTTATTTCTATACAGAACTTAAAAAAATGGTATGGCTCGTTTCAGGCACTTGATGGTATTTCTCTCGAAGTGGAGTTGGGACAAAAAGTAGTTATTTGTGGACCATCAGGATCTGGAAAATCTACACTCATTAGATGTATAAACAAGTTAGAAGAACACCAAGAAGGAAAAATTTATGTCATGGGCGAAGAACTTAATGATGATGTAAAAAATATCAATCACATAAGAAGAGAAGTAGGAATGGTATTTCAAAGTTTTAATCTTTTTAGACACATGACAATAATGCAAAATCTTATTTTGGCACCAATGTGGGTGCGAAAAAAATGAAACAAAAAGATGCAGAAAAAATAGCCTTGCAGTATTTAGAAAAAAGTAAGCCTTGTAGAACAAGCACATAAATATCCTGCTCAATTATCTGGTGGACAACAACAAAGAGTTGCAATAGCACGAAGTTTATGTATGGAACCAAAAGTGTTATTGTTTGACGAACCCACCTCGGCACTTGACCCAGAACTTATTAACGAAGTATTAGATGTTATGATTACCCTTGCAAAAGAAGGCATGACCATGGTTTGTGTAACACATGAAATGGGCTTTGCAAAACAAGTTGCAGATAAAGTTATCTTTATGGACTATGGCAAAATTATAGAACAAAATACTCCTAATGCCTTTTTTACAAATCCAAAACATGAGCGCACAAGAGAGTTTTTAGGACAAATACATGCACTGTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00528	BPD_transp_1	Binding-protein-dependent transport system inner membrane component	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000515	Domain	ABC transporter type 1, transmembrane domain MetI-like	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR010065	Domain	Amino acid ABC transporter, permease protein, 3-TM domain	Interproscan
IPR017871	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035906	Homologous_superfamily	MetI-like superfamily	Interproscan
IPR043429	Family	ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR30614	MEMBRANE COMPONENT OF AMINO ACID ABC TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006865	Biological Process	amino acid transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0043190	Cellular Component	ATP-binding cassette (ABC) transporter complex	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0071705	Biological Process	nitrogen compound transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-