Gene ID | Annotation | Contig | Start | End | Strand |
---|---|---|---|---|---|
MBSQW58_g13945 | SLR0882 PROTEIN-RELATED | ctg680 | 90610 | 94489 | - |
CDS | |||||
MBSQW58_g13945 | |||||
Transcript |
MBSQW58_g13945 |
Protein |
MBSQW58_g13945 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00013 | KH_1 | KH domain | Domain | Interproscan |
PF00575 | S1 | S1 RNA binding domain | Domain | Interproscan |
PF03739 | LptF_LptG | Lipopolysaccharide export system permease LptF/LptG | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR003029 | Domain | S1 domain | Interproscan |
IPR004087 | Domain | K Homology domain | Interproscan |
IPR004088 | Domain | K Homology domain, type 1 | Interproscan |
IPR005495 | Family | Permease LptG/LptF-related | Interproscan |
IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
IPR027408 | Homologous_superfamily | PNPase/RNase PH domain superfamily | Interproscan |
IPR036345 | Homologous_superfamily | Exoribonuclease, PH domain 2 superfamily | Interproscan |
IPR036612 | Homologous_superfamily | K Homology domain, type 1 superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR33529 | SLR0882 PROTEIN-RELATED | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0015920 | Biological Process | lipopolysaccharide transport | Interproscan |
GO:0016020 | Cellular Component | membrane | Interproscan |
GO:0043190 | Cellular Component | ATP-binding cassette (ABC) transporter complex | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |