Detailed information of MBSQW58_g13217 in Bathyacmaea lactea Gene info
Gene IDAnnotationContigStartEndStrand
MBSQW58_g13217DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2ctg57499741123590+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyDUB|USP|USP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13423UCH_1Ubiquitin carboxyl-terminal hydrolaseDomainInterproscan
PF20770PAN2_NPAN2 N-terminalRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR028881DomainPAN2, UCH domainInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR048841DomainPAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminalInterproscan
IPR050785FamilyPAN2-PAN3 complex catalytic subunitInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0031251Cellular ComponentPAN complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP