| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| MBSQW58_g11654 | LD41958P | ctg419 | 301552 | 331529 | - |
| CDS | |||||
| MBSQW58_g11654 | |||||
| Transcript |
| MBSQW58_g11654 |
| Protein |
| MBSQW58_g11654 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF01217 | Clat_adaptor_s | Clathrin adaptor complex small chain | Domain | Interproscan |
| PF01363 | FYVE | FYVE zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000306 | Domain | FYVE zinc finger | Interproscan |
| IPR000804 | Conserved_site | Clathrin adaptor complex, small chain | Interproscan |
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR011012 | Homologous_superfamily | Longin-like domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR017455 | Domain | Zinc finger, FYVE-related | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR022775 | Domain | AP complex, mu/sigma subunit | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR042234 | Family | WD repeat and FYVE domain-containing protein 1/2 | Interproscan |
| IPR044733 | Family | AP-1 complex subunit sigma | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46189 | LD41958P | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005769 | Cellular Component | early endosome | Interproscan |
| GO:0006886 | Biological Process | intracellular protein transport | Interproscan |
| GO:0016192 | Biological Process | vesicle-mediated transport | Interproscan |
| GO:0030117 | Cellular Component | membrane coat | Interproscan |
| GO:0030121 | Cellular Component | AP-1 adaptor complex | Interproscan |
| GO:0035615 | Molecular Function | clathrin adaptor activity | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
