Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Lsat_s144.g0008.t1 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 | Lsat_scaffold144 | 124947 | 162835 | - |
CDS | |||||
Lsat_s144.g0008.t1 | |||||
Transcript |
Lsat_s144.g0008.t1 |
Protein |
Lsat_s144.g0008.t1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF02463 | SMC_N | RecF/RecN/SMC N terminal domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR003395 | Domain | RecF/RecN/SMC, N-terminal | Interproscan |
IPR027131 | Family | Structural maintenance of chromosomes protein 5 | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR45916 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
GO:0003697 | Molecular Function | single-stranded DNA binding | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006281 | Biological Process | DNA repair | Interproscan |
GO:0016887 | Molecular Function | ATP hydrolysis activity | Interproscan |
GO:0030915 | Cellular Component | Smc5-Smc6 complex | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |