Detailed information of Lsat_s141.g0012.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s141.g0012.t1HELICASE WITH DEATH DOMAIN-RELATEDLsat_scaffold141449433469581-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04851ResIIIType III restriction enzyme, res subunitFamilyInterproscan
PF11648RIG-I_C-RDC-terminal domain of RIG-IDomainInterproscan
PF18119RIG-I_CRIG-I receptor C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR006935DomainHelicase/UvrB, N-terminalInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR021673DomainRIG-I-like receptor, C-terminal regulatory domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038557Homologous_superfamilyRIG-I-like receptor, C-terminal domain superfamilyInterproscan
IPR041204DomainRIG-I-like receptor, C-terminalInterproscan
IPR051363FamilyRIG-I-like Receptor (RLR) HelicaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14074HELICASE WITH DEATH DOMAIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP