Detailed information of Lsat_s118.g0027.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s118.g0027.t1SLR5058 PROTEINLsat_scaffold118761936791834-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00307CHCalponin homology (CH) domainDomainInterproscan
PF00619CARDCaspase recruitment domainDomainInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF18738HEPN_DZIP3DZIP3/ hRUL138-like HEPNDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001315DomainCARD domainInterproscan
IPR001715DomainCalponin homology domainInterproscan
IPR003096FamilySmooth muscle protein/calponinInterproscan
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR036872Homologous_superfamilyCH domain superfamilyInterproscan
IPR041249DomainDZIP3-like HEPN domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46844SLR5058 PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP