| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s101.g0030.t1 | RABCONNECTIN-RELATED | Lsat_scaffold101 | 1539177 | 1601495 | - |
| CDS | |||||
| Lsat_s101.g0030.t1 | |||||
| Transcript |
| Lsat_s101.g0030.t1 |
| Protein |
| Lsat_s101.g0030.t1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF12234 | Rav1p_C | RAVE protein 1 C terminal | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR022033 | Domain | RAVE complex protein Rav1 C-terminal | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR052208 | Family | DmX-like/RAVE complex component | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13950 | RABCONNECTIN-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0007035 | Biological Process | vacuolar acidification | Interproscan |
| GO:0043291 | Cellular Component | RAVE complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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