Detailed information of Lsat_s090.g0074.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s090.g0074.t1WD REPEAT PROTEIN 26-RELATEDLsat_scaffold09015856571612395-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF17814LisH_TPLLisH-like dimerisation domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR006594Conserved_siteLIS1 homology motifInterproscan
IPR006595DomainCTLH, C-terminal LisH motifInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR051350FamilyWD repeat-containing signal transduction regulatorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22838WD REPEAT PROTEIN 26-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0034657Cellular ComponentGID complexInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP