| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s088.g0052.t1 | VACUOLAR SORTING PROTEIN 53 | Lsat_scaffold088 | 1192570 | 1215708 | - |
| CDS | |||||
| Lsat_s088.g0052.t1 | |||||
| Transcript |
| Lsat_s088.g0052.t1 |
| Protein |
| Lsat_s088.g0052.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04100 | Vps53_N | Vps53, N-terminal | Repeat | Interproscan |
| PF16854 | VPS53_C | Vacuolar protein sorting-associated protein 53 C-terminus | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007234 | Domain | Vps53, N-terminal | Interproscan |
| IPR031745 | Domain | Vps53, C-terminal | Interproscan |
| IPR038260 | Homologous_superfamily | Vps53, C-terminal domain superfamily | Interproscan |
| IPR039766 | Family | Vacuolar protein sorting-associated protein 53 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12820 | VACUOLAR SORTING PROTEIN 53 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000938 | Cellular Component | GARP complex | Interproscan |
| GO:0042147 | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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