| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s086.g0006.t1 | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE | Lsat_scaffold086 | 208386 | 245070 | + |
| CDS | |||||
| Lsat_s086.g0006.t1 | |||||
| Transcript |
| Lsat_s086.g0006.t1 |
| Protein |
| Lsat_s086.g0006.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01207 | Dus | Dihydrouridine synthase (Dus) | Family | Interproscan |
| PF18044 | zf-CCCH_4 | CCCH-type zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR035587 | Domain | DUS-like, FMN-binding domain | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| IPR041367 | Domain | E3 ligase, CCCH-type zinc finger | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45846 | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0017150 | Molecular Function | tRNA dihydrouridine synthase activity | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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