| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s077.g0006.t1 | AUTOPHAGY PROTEIN 12 | Lsat_scaffold077 | 283536 | 295130 | + |
| CDS | |||||
| Lsat_s077.g0006.t1 | |||||
| Transcript |
| Lsat_s077.g0006.t1 |
| Protein |
| Lsat_s077.g0006.t1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | ULD|UBL|ATG8 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04110 | APG12 | Ubiquitin-like autophagy protein Apg12 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007242 | Family | Ubiquitin-like protein Atg12 | Interproscan |
| IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13385 | AUTOPHAGY PROTEIN 12 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000045 | Biological Process | autophagosome assembly | Interproscan |
| GO:0000422 | Biological Process | autophagy of mitochondrion | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006501 | Biological Process | C-terminal protein lipidation | Interproscan |
| GO:0034045 | Cellular Component | phagophore assembly site membrane | Interproscan |
| GO:0034274 | Cellular Component | Atg12-Atg5-Atg16 complex | Interproscan |
| GO:0044804 | Biological Process | nucleophagy | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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