Detailed information of Lsat_s062.g0106.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s062.g0106.t1HOMEODOX-CONTAINING PROTEIN 1 HMBOX1Lsat_scaffold06232912693304437-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHomeobox

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF04814HNF-1_NHepatocyte nuclear factor 1 (HNF-1), N terminusFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR001387DomainCro/C1-type helix-turn-helix domainInterproscan
IPR006899DomainHepatocyte nuclear factor 1, N-terminalInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR010982Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR040363FamilyHomeobox-containing protein 1Interproscan
IPR044866DomainHNF-1, dimerization domainInterproscan
IPR044869DomainHNF-1, POU-specific (POUs) atypical domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR14618HOMEODOX-CONTAINING PROTEIN 1 HMBOX1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003691Molecular Functiondouble-stranded telomeric DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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