| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s057.g0146.t1 | ATAXIN-3-RELATED | Lsat_scaffold057 | 3637607 | 3647985 | - |
| CDS | |||||
| Lsat_s057.g0146.t1 | |||||
| Transcript |
| Lsat_s057.g0146.t1 |
| Protein |
| Lsat_s057.g0146.t1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DUB|Josephin|Josephin |
| Ubiquitin Family | UBD|Alpha-Helix|UIM |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02099 | Josephin | Josephin | Family | Interproscan |
| PF02809 | UIM | Ubiquitin interaction motif | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003903 | Conserved_site | Ubiquitin interacting motif | Interproscan |
| IPR006155 | Domain | Josephin domain | Interproscan |
| IPR033865 | Family | Machado-Joseph disease protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14159 | ATAXIN-3-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004843 | Molecular Function | cysteine-type deubiquitinase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0016579 | Biological Process | protein deubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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