Detailed information of Lsat_s026.g0146.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s026.g0146.t1BLUE CHEESELsat_scaffold02641820744225902-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF01363FYVEFYVE zinc fingerDomainInterproscan
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF14844PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000306DomainFYVE zinc fingerInterproscan
IPR000409DomainBEACH domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR017455DomainZinc finger, FYVE-relatedInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR023362DomainPH-BEACH domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR051944FamilyBEACH domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46108BLUE CHEESEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP