Detailed information of Lsat_s021.g0146.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s021.g0146.t1CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT BLsat_scaffold02133083243341762-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR045145FamilyChromatin assembly factor 1 subunit Cac2/CHAF1B/FAS2Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15271CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT BInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0006335Biological ProcessDNA replication-dependent chromatin assemblyInterproscan
GO:0033186Cellular ComponentCAF-1 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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