| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s019.g0261.t1 | CADHERIN-87A | Lsat_scaffold019 | 5316426 | 5334100 | + |
| CDS | |||||
| Lsat_s019.g0261.t1 | |||||
| Transcript |
| Lsat_s019.g0261.t1 |
| Protein |
| Lsat_s019.g0261.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00028 | Cadherin | Cadherin domain | Domain | Interproscan |
| PF00054 | Laminin_G_1 | Laminin G domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001791 | Domain | Laminin G domain | Interproscan |
| IPR002126 | Domain | Cadherin-like | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR050174 | Family | Protocadherin/Cadherin-related Cell Adhesion | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24028 | CADHERIN-87A | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005887 | Cellular Component | plasma membrane | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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