Detailed information of Lsat_s018.g0161.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s018.g0161.t1ZINC FINGER PROTEINLsat_scaffold01838791363903340+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyTHAP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF05485THAPTHAP domainDomainInterproscan
PF09607BrkDBDBrinker DNA-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR010921Homologous_superfamilyTrp repressor/replication initiatorInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR018586DomainBrinker DNA-binding domainInterproscan
IPR038441Homologous_superfamilyTHAP-type zinc finger superfamilyInterproscan
IPR050688FamilyZinc finger and ubiquitin peptidase domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24403ZINC FINGER PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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