| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s018.g0080.t1 | CHIMERIN FAMILY MEMBER | Lsat_scaffold018 | 2149990 | 2191598 | - |
| CDS | |||||
| Lsat_s018.g0080.t1 | |||||
| Transcript |
| Lsat_s018.g0080.t1 |
| Protein |
| Lsat_s018.g0080.t1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|SH3 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00017 | SH2 | SH2 domain | Domain | Interproscan |
| PF00130 | C1_1 | Phorbol esters/diacylglycerol binding domain (C1 domain) | Domain | Interproscan |
| PF00620 | RhoGAP | RhoGAP domain | Domain | Interproscan |
| PF07647 | SAM_2 | SAM domain (Sterile alpha motif) | Domain | Interproscan |
| PF07653 | SH3_2 | Variant SH3 domain | Domain | Interproscan |
| PF16454 | PI3K_P85_iSH2 | Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000198 | Domain | Rho GTPase-activating protein domain | Interproscan |
| IPR000980 | Domain | SH2 domain | Interproscan |
| IPR001452 | Domain | SH3 domain | Interproscan |
| IPR001660 | Domain | Sterile alpha motif domain | Interproscan |
| IPR002219 | Domain | Protein kinase C-like, phorbol ester/diacylglycerol-binding domain | Interproscan |
| IPR008936 | Homologous_superfamily | Rho GTPase activation protein | Interproscan |
| IPR013761 | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
| IPR032498 | Domain | PI3K regulatory subunit p85-related , inter-SH2 domain | Interproscan |
| IPR035022 | Domain | PI3K p85 subunit, N-terminal SH2 domain | Interproscan |
| IPR036028 | Homologous_superfamily | SH3-like domain superfamily | Interproscan |
| IPR036860 | Homologous_superfamily | SH2 domain superfamily | Interproscan |
| IPR046349 | Homologous_superfamily | C1-like domain superfamily | Interproscan |
| IPR051854 | Family | Rho-type GTPase-activating protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46075 | CHIMERIN FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005096 | Molecular Function | GTPase activator activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0007165 | Biological Process | signal transduction | Interproscan |
| GO:0043087 | Biological Process | regulation of GTPase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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