| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s017.g0325.t1 | CALPONIN | Lsat_scaffold017 | 7110850 | 7130804 | + |
| CDS | |||||
| Lsat_s017.g0325.t1 | |||||
| Transcript |
| Lsat_s017.g0325.t1 |
| Protein |
| Lsat_s017.g0325.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF00402 | Calponin | Calponin family repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000557 | Repeat | Calponin repeat | Interproscan |
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR003096 | Family | Smooth muscle protein/calponin | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR050606 | Family | Calponin-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47385 | CALPONIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0007015 | Biological Process | actin filament organization | Interproscan |
| GO:0015629 | Cellular Component | actin cytoskeleton | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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