Detailed information of Lsat_s017.g0249.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s017.g0249.t1ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASELsat_scaffold01753671665387560+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF05986ADAMTS_spacer1ADAM-TS Spacer 1DomainInterproscan
PF08686PLACPLAC (protease and lacunin) domainDomainInterproscan
PF19030TSP1_ADAMTSThrombospondin type 1 domainDomainInterproscan
PF19236ADAMTS_CR_3ADAMTS cysteine-rich domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR010294DomainADAMTS/ADAMTS-like, Spacer 1Interproscan
IPR010909DomainPLACInterproscan
IPR013273FamilyADAMTS/ADAMTS-likeInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR045371DomainADAMTS/ADAMTS-like, cysteine-rich domain 3Interproscan
IPR050439FamilyADAMTS and ADAMTS-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13723ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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