Detailed information of Lsat_s017.g0058.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s017.g0058.t130S RIBOSOMAL PROTEIN S1Lsat_scaffold01713849761404730+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00575S1S1 RNA binding domainDomainInterproscan
PF09371Tex_NTex-like protein N-terminal domainDomainInterproscan
PF12836HHH_3Helix-hairpin-helix motifDomainInterproscan
PF16921Tex_YqgFTex protein YqgF-like domainDomainInterproscan
PF17674HHH_9HHH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003029DomainS1 domainInterproscan
IPR006641DomainYqgF/RNase H-like domainInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR018974DomainTex-like protein, N-terminalInterproscan
IPR023319Homologous_superfamilyTex-like protein, HTH domain superfamilyInterproscan
IPR023323Homologous_superfamilyTex-like domain superfamilyInterproscan
IPR032639DomainTex protein, YqgF-like domainInterproscan
IPR037027Homologous_superfamilyYqgF/RNase H-like domain superfamilyInterproscan
IPR041692DomainHHH domain 9Interproscan
IPR050437FamilyBacterial ribosomal protein bS1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR1072430S RIBOSOMAL PROTEIN S1Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0006412Biological ProcesstranslationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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