| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s016.g0383.t1 | NUCLEASE-RELATED | Lsat_scaffold016 | 9758777 | 9768901 | + |
| CDS | |||||
| Lsat_s016.g0383.t1 | |||||
| Transcript |
| Lsat_s016.g0383.t1 |
| Protein |
| Lsat_s016.g0383.t1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | zf-CCCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00642 | zf-CCCH | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | Family | Interproscan |
| PF06220 | zf-U1 | U1 zinc finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR003604 | Domain | Matrin/U1-C-like, C2H2-type zinc finger | Interproscan |
| IPR013085 | Domain | U1-C, C2H2-type zinc finger | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| IPR036855 | Homologous_superfamily | Zinc finger, CCCH-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16465 | NUCLEASE-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005689 | Cellular Component | U12-type spliceosomal complex | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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