Detailed information of Lsat_s016.g0345.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s016.g0345.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASELsat_scaffold01688427768878810+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF06337DUSPDUSP domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan
PF13833EF-hand_8EF-hand domain pairDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR006615DomainPeptidase C19, ubiquitin-specific peptidase, DUSP domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR035927Homologous_superfamilyDUSP-like superfamilyInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP