Detailed information of Lsat_s016.g0332.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s016.g0332.t1ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2Lsat_scaffold01684724218484249-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF135322OG-FeII_Oxy_22OG-Fe(II) oxygenase superfamilyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR005123DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR027450DomainAlpha-ketoglutarate-dependent dioxygenase AlkB-likeInterproscan
IPR032852FamilyDNA oxidative demethylase ALKBH2Interproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR037151Homologous_superfamilyAlpha-ketoglutarate-dependent dioxygenase AlkB-like superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR31573ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006307Biological ProcessDNA alkylation repairInterproscan
GO:0008198Molecular Functionferrous iron bindingInterproscan
GO:0035511Biological Processobsolete oxidative DNA demethylationInterproscan
GO:0043734Molecular Functionobsolete DNA-N1-methyladenine dioxygenase activityInterproscan
GO:0051747Molecular Functioncytosine C-5 DNA demethylase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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