Detailed information of Lsat_s010.g0101.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s010.g0101.t1ATP-DEPENDENT CLP PROTEASELsat_scaffold01024299152462999+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2H2

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF07724AAA_2AAA domain (Cdc48 subfamily)DomainInterproscan
PF10431ClpB_D2-smallC-terminal, D2-small domain, of ClpB protein DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13912zf-C2H2_6C2H2-type zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001270FamilyClpA/B familyInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR003959DomainATPase, AAA-type, coreInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR019489DomainClp ATPase, C-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050130FamilyATP-dependent Clp protease/Chaperone ClpA/ClpBInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11638ATP-DEPENDENT CLP PROTEASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0034605Biological Processcellular response to heatInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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