| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s010.g0076.t1 | DESMOGLEIN FAMILY MEMBER | Lsat_scaffold010 | 1785887 | 1833781 | + |
| CDS | |||||
| Lsat_s010.g0076.t1 | |||||
| Transcript |
| Lsat_s010.g0076.t1 |
| Protein |
| Lsat_s010.g0076.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00028 | Cadherin | Cadherin domain | Domain | Interproscan |
| PF08266 | Cadherin_2 | Cadherin-like | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002126 | Domain | Cadherin-like | Interproscan |
| IPR013164 | Domain | Cadherin, N-terminal | Interproscan |
| IPR015919 | Homologous_superfamily | Cadherin-like superfamily | Interproscan |
| IPR020894 | Conserved_site | Cadherin conserved site | Interproscan |
| IPR050971 | Family | Cadherin domain-containing protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24025 | DESMOGLEIN FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0005911 | Cellular Component | cell-cell junction | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0098609 | Biological Process | cell-cell adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
