| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s009.g0451.t1 | BARDET-BIEDL SYNDROME 10 PROTEIN | Lsat_scaffold009 | 10890386 | 10911484 | - |
| CDS | |||||
| Lsat_s009.g0451.t1 | |||||
| Transcript |
| Lsat_s009.g0451.t1 |
| Protein |
| Lsat_s009.g0451.t1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | HTH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00118 | Cpn60_TCP1 | TCP-1/cpn60 chaperonin family | Family | Interproscan |
| PF05225 | HTH_psq | helix-turn-helix, Psq domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002423 | Family | Chaperonin Cpn60/GroEL/TCP-1 family | Interproscan |
| IPR007889 | Domain | DNA binding HTH domain, Psq-type | Interproscan |
| IPR027409 | Homologous_superfamily | GroEL-like apical domain superfamily | Interproscan |
| IPR027410 | Homologous_superfamily | TCP-1-like chaperonin intermediate domain superfamily | Interproscan |
| IPR027413 | Homologous_superfamily | GroEL-like equatorial domain superfamily | Interproscan |
| IPR042619 | Family | Bardet-Biedl syndrome 10 protein | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14667 | BARDET-BIEDL SYNDROME 10 PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0051131 | Biological Process | chaperone-mediated protein complex assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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